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Summary Expression Gene Literature (5) GO Terms (7) Nucleotides (144) Proteins (29) Interactants (429) Wiki
XB-GENEPAGE-5900837
Gene Symbol:
kdm2a

Gene Name:
lysine (K)-specific demethylase 2A

Synonyms:
fbxl11 , jhdm1a ( Add synonyms , Nomenclature history )

Gene Function:
zinc finger, CXXC type

Protein Function :
Histone demethylase that specifically demethylates 'Lys-36' of histone H3, thereby playing a central role in histone code. Preferentially demethylates dimethylated H3 'Lys-36' residue while it has weak...[+]



Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-5900838 XB-GENE-17331848 XB-GENE-6485793
Gene Symbol kdm2a kdm2a.L kdm2a.S
Chromosome Chr07 chr7L chr7S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 496596
108696323
108697538
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot NCBI Protein NCBI Protein
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine kdm2a kdm2a.L kdm2a.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tneu054b08      
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards KDM2A OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Kdm2a MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Kdm2a Ensembl
zebrafish
ZFIN, AGR kdm2ab kdm2aa ZFIN Ensembl
chicken
GEISHA KDM2A Ensembl
fruit fly
worm
Publications
First Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006                                      
Most Recent High variability of expression profiles of homeologous genes for Wnt, Hh, Notch, and Hippo signaling pathways in Xenopus laevis., Dev Biol 2017                    
All View All Papers 2 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 7 terms 3 terms 0 term
PANTHER kdm2a
KEGG Pathways K10276
KOG [B] F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks kdm2a
Morpholinos kdm2a MO1 , kdm2a MO2 kdm2a MO1 , kdm2a MO2 kdm2a MO1 , kdm2a MO2
Clones Horizon Source BioScience Horizon Horizon Source BioScience

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