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Summary Expression Gene Literature (17) GO Terms (13) Nucleotides (92) Proteins (31) Interactants (404) Wiki
XB-GENEPAGE- 488066

Gene Symbol: sox7

Gene Name: SRY-box 7

Synonyms: xSox7
Add Xenopus synonyms , Nomenclature history


Gene Function: HMG-box transcription factor

Protein Function:
Transcription factor. Binds to the DNA sequence 5'-AACAAT-3'. Acts downstream of vegt and upstream of nodal signaling to promote endodermal and mesodermal differentiation by promoting vegt-induced expr...[+]


Interactants: YYY

OMIM Disease Associations:
1/2
 
Xenbase Gene ID XB-GENE-488067 XB-GENE-865761 XB-GENE-17331011
Gene Symbol sox7 sox7.L sox7.S
Chromosome scaffold_13 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq
Protein Refseq Swiss-Prot TrEMBL Refseq Swiss-Prot TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.66419 Xl.1241
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 31 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine sox7 sox7.L sox7.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SOX7 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Sox7 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN sox7 ZFIN Ensembl
chicken
GEISHA SOX7 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Cloning and characterization of Xenopus laevis xSox7 cDNA. [Biochim Biophys Acta 1996]
Most recent: Global analysis of asymmetric RNA enrichment in oocytes reveals low conservation between closely related Xenopus species. [Mol Biol Cell 2017]
View All Papers 4 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 11 terms 2 terms
EC
PANTHER sox7
KEGG Pathways K09270 K09270 K09270
KOG [K] HMG-box transcription factor
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones   EXRC - 1 clone(s)  
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino sox7 MO1 , sox7 MO2 sox7 MO1 , sox7 MO2 sox7 MO1 , sox7 MO2
Affymetrix 1.0 Str.39849.1.S1_at Xl.1241.1.S1_at
Affymetrix 2.0 Xl2.1241.1.S1_at

Symbol legend[+]

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