Gene Symbol: krt5.5 Gene Name: keratin 5, gene 5 Synonyms: xlk Add Xenopus synonyms Gene Function: fibrous structural protein Interactants: ahr(2) , cyp1a1(2) , krt12(2) , xk81a1(2) , cyp26a1(1) , cyp27b1(1) , gtf2a1l(1) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 4.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >XM_002935730|PREDICTED: Xenopus (Silurana) tropicalis keratin, type II cytoskeletal-like (LOC100489468), mRNA GTCTCCTTCACTTTCTGTTTCTGTACAATAACTTCAATTTTCTTTTCAACCCAAAATGAGTCATTATAAGCAGTTTAGTGTTCGATCTGTTGCAACCTCAGGCAAGCCGGGCTTCAGCTCATTTTCTGTGTCTAAAAGTGGTGGAGGTTTTGGAGGTTCTTCAGGAGGGGGTAGCTTTGGTAGCAGAAGTCTTTACAGTGTGGGGTCTAGGAAAGTCAGTTCCGTTGGCTCTGCAAGTGGAGGTGGCTTTGGATTTGCAGCAGGTGGTTTTGGTGGAAGAGGTTTTGGTGGTGGAGTAGGTGGAGGAGCTTTTGGAGGGGCTGGCGGTGGTGCCTTCGGAGGAGCTGGCGGTGGTGCCTTTGGAGGAGCTGGCGGTGGTGGCTTTGGAGGAGCTGGATTTGGAGGCTTTGGAGGTGCTGGCTTTCCTGGTGGACCATCAGTTGGTATTCAAGAAGTCACAGTCAACCAAAGTCTCTTGGCACCACTGAACCTGGAAATTGATCCAACTATACAGAAAGTTCGACTGGAGGAGAGAGAACAAATTAAAACTCTGAACAACAAATTTGCTTCCTTTATTGACAAGGTCCGGTTCCTTGAACAACAGAATAAGGTACTTGAAACTAAATGGAGCTTATTGCAAGAGCAAGGAGGCCAAGTAAAGGGGTCAAGAAAAAACAACATTGACCCTATTTTTGACGCCTATATCAACAGCCTCAAGAGGCAACTGGATGCTCTGCAAAATGATAAACTACGGCTTGATGGGGAGTTAAGGAATATGCAAGACTTGGTTGATGATTTTAAAAACAAATACGAAGATGAAATTAATAAGAGAACATCAGCTGAAAACGAGTTTGTTGTTATTAAGAAGGATGTGGATGCTGCTTACATGGGCAAGGTGGAGCTGGAAGCCAAAGTAGATGCTCTGACAGATGAACTCAACTTCCTGAGGACCTTCTTTGAAGCTGAACTGGGTGAGTTGCAGGCTCAGATCTCTGACACCTCTGTTGTCCTGTCCATGGACAATAACCGAGCTTTGGATCTGGAAAGCATCATCGCTGAGGTGAAGTCTCAGTATGAAGACATAGCGAAGAAGAGCAGAGCTGAAGCTGAATCTGTTTACCAAGGCAAGGTTCAAGAGTTGCAGGCATCTGCAGGTGAACAAGGAGATGTTCTGCGCAACACGAAGAGTGAGATCTCTGAGCTCAACCGCAAATCCCAGAGACTGAAAGCTGAAATTGAAAATGTCAAGAAACAGATCGCCAAGCTGCAAGCATCTATAACTGAAGCGGAGGAGCGTGGGGATCTTGTTCTGAAAGATGCTCAGTCGAAACTCGCCGAGCTGGAGGCTGCTCTGCAAAAGGTTAAGCAGGACATGGCTCGCCAGCTTCGGGAATACCAGGAACTCATGAATGTGAAACTGGCTCTGGATGTTGAAATTGCTACTTACAGAAAACTGCTGGAAGGAGAAGAATTCAGGCTTAATTCAGATGTCAATAATGTCAGCATTTCTGTCATTAGTTCTGGTGGCAAAAGTTCCCTAGGAGGAGGAGGTGGTGGATCTGGAGCAGGATTCGGCTTCGGAAGTGGTGGTGCTGCCTTTGGTGGAAGTGGAGGGGCTGCCTTTGGTGGAAGTGGTGGCGCTGCCTTTGGTGGCAGTGGCGTTTCCTTTGGCTCAGGAGGTGGTGGATTCAGCTCCTCAAGCTCCTCATTTGGTGGTGGTGTCGGCAGTGTGCGATATTCATCCAGTCAATCCAGCTACAGGAGTTAATTAAGCCAAGAAATTAGGCCAAAATCAGTGCCCAGAACACAAAATGCATTGCCTGCCTGTACAGATACTACTGTTCCTTCAGATTGCTGTAAACATTCTGTTCTGCAGATCCCATCCTCATGCCTTTCTCTTTCACTAAAACACACTAGTGGGGGGATGAGAAAGTAATCACTCTCCAACAGAAAGGGCTTTGGTGTAGCCATGTCTCCTACTGCCTTTCCTCAATAAGGTGCTCTCAGTCCATGCTTGTCCCTCAAGCAGTTCATTTTCTGTGCAGGAGAAACAGGAAAAGATCTACATTGATTTACAAAATAATAAAAAACCATAAAAATAACAAAAAACAATACAGTGAAATGCACATTTTTGGTACAATCTCTCCAAAAACTTTAGCTTTGTATGAAATTAGGTGTCAATTGCAATATAGGCATTAGCCTCATATGTGGCTCTAGTGCAACATTAATGCTTTATAAAGGTAAAACCATCAGTGCAGGTCCCTGCAGTGGCACAAATGGAAGCAAACATGAGCAGTCTTTATGAAGCAGTTGTTACCTTTTTTCTTACATTTGTACCAATTTGTGAACCCCCTCCACTAGGTGTTACTGTTATGTTTCTGTTAATGTGCACTGAGCTTAAGCAAAGCTGAAGTTGTAGCACAAATAAACAGAATCCTGTTGCAATATTAA	Refseq >NM_001085584|Xenopus laevis larval keratin (lk-a), mRNA CAGAGGGGTTCTGTCTCCTTGACTCTCTGTTTCTGTACATCAATTTCAATTTTGTTCAACCCAAAATGAGTCAGTATAAGCAGTTTAGTGTTCGATCAGTTGCAACTTCAGGCAAGCCTGGCTTCAGTTCATTTTCTGTGGCTAAGAGTGGTGGAGGATTTGGAAGTGCTTCAGGAGGAGGTAGCTTTGGTAGCAGAAGTCTTTATAATCTAGGGTCAAGGAAGGTCAGTTCTGTTAGCTCTGCAAGTGGAGGTGGCTATGGAAGTGCAGCAGGTGGTTTTGGTGGAAGAGTAAGTGGTTTTGGTGGTGGAGTAGGTGGGGGAGGCTATGGAGGAGCTGGTGGTGCCTTTGGAGGAGCTGGTGGTGCATTTGGAGGAGCTGGCGGTGGTGGCTTTGGAGGAGCTGGATTTGGAGGTTTTGGAGGTGCTGGCTTTCCTGGTGGACCATCAGCTGGTATACAAGAAGTTACAATCAACCAAAGTCTCTTGGCACCACTGAACCTGGAAATTGATCCAAACATTCAGAGAGTTCGAGTGGAGGAGAGAGAACAAATTAAAACTCTGAACAACAAATTTGCTTCTTTTATTGACAAGGTCCGGTTCCTTGAACAACAGAATAAGGTGCTTGAAACTAAATGGACCTTATTGCAAGAACAAGGAGGCCAAGTGAAAGGGTCAAGAAAAAGCAACACTGAGCCTATTTTCGATGCCTATGTCAACAACCTCAAGAGGCAACTGGATGCTTTGCAAAATGATAAACTAAGGCTTGACGGGGAGTTAAGAAATATGCAAGACTTGGTCGATGACTTCAAAAATAAATACGAAGATGAAATTAACAAGAGAACATCAGCAGAAAATGAGTTTGTTGTTATTAAGAAGGATGTGGATGCTTCTTACATGGGCAAGGTGGAACTGGAAGCCAAAGTAGATGCTCTGACAGATGAACTCAACTTCCTGAGGACCTTCTTTGAAGCTGAACTGGGTGAGTTGCAGGCTCAGAACTCTGACACCTCTGTTGTCCTGTCCATGGACAATAACCGAGCTTTGGATCTGGAAAGCATCATCACTGAGGTGAAGGCTCAGTATGAAGACATAGCAAAGAAGAGCAGAGCTGAAGCTGAATCTGTTTACCAGGACAAGGTTCAAGCATTGCAAGCATCTGCAGGCGAACAAGGAGATGTTCTGCGCAATACAAAAAATGAGATCTCAGAGCTCAATCGTACAGCCCAGAGACTGAAAGCTGAAATTGGAAATGTGAAGAAACAGATCGCCAAGCTGCAGGCATCTATTACTGAAGCAGAGGAGCGAGGGGATCTTGTTCTGAAAGATGCTCAAACCAAACTTGCTGAGCTGGAGGTTGCTCTGCAGAAGGCCAAGCAGGACATGGCTCTCCAGTTGAGGGAATACCAGGAACTGATGAATGTGAAACTGGCCCTGGATGTTGAAATTGCTACTTACAGGAAGCTGCTGGAAGGAGAAGAGAGCAGGATTAATTCAGATGTCAATAATTTCAGCATCTCTGTCATCAGCTCTGGAGGCAAAAGTTCCCTACGAGGAGGAGGAGGAGGTGGATCTGGAGCAGGCTTCGGCTTTGGAAGTGGTGGTGGAGGCTTCGGTGGAAGTGGTGGTGGAGCCTTCAGTGGAAGTGGTGGTGGAGCCTTTGGTGGAAGTGGTGGCAGTGCCTTTGGTGGCAGTGGCCTTTCCTTTGGCTCAGGAGGTGGCGGATTCAGCTCCTCAAGCTCCTCATTTGGTGGTGGCGTCAGCAGCGGTGTGAGATTTTCTTCCAGCAAGTCCAGCTACAGGAGTTAATCAAGTCATGAAATGAGGCAAATATCAGTGCCCAGAACACAATAATTCATTGCCTGTTAATACAGATACTGCGCTTTCAGTTGCTGTAAACATTCTGTTCTGCAGATCCCATCCTCATGACTTTCTCTTTTAAGCAAACACATGTTTCCACTAAGGCTTTTCCGCAATAAGGTGCTGTCATTCCATACTTGTCTCTCAAGCATTGTCTGTGCAGGAGAAAAAAGGATTTAAAATTTTTGACAAAATGGTAAAAAATAAACATAATAAAAATAATACAATGCAATGCACATCCTTGTTACAATGCCTCCCAATTGTAATCCTAATTGCACGTTTGGGGTTATTCTCATATGTGGCAATCCTGCCCCATTTCTGCTTCATAAAGGTAAAACGATCGACGCAGGTCCCTGCAGTGGCACAAACAGAAGCAAACATGAGCAATCATTGTTAAGCATTTGACACCTTTTTTCCTCCTCGATTTGTAAATTCCACCCACTAGGGGGATACTGTTATGTTTCTATAAATGTGCACTGAGCTTAAGCATTGTGGCAAAAATAAACATAATCCTGCTGCAATATAAAAAAAAAAAAAAAAAAAAAAA
Protein		NCBI Protein >XP_002935776|PREDICTED: keratin, type II cytoskeletal-like [Xenopus (Silurana) tropicalis] MSHYKQFSVRSVATSGKPGFSSFSVSKSGGGFGGSSGGGSFGSRSLYSVGSRKVSSVGSASGGGFGFAAGGFGGRGFGGGVGGGAFGGAGGGAFGGAGGGAFGGAGGGGFGGAGFGGFGGAGFPGGPSVGIQEVTVNQSLLAPLNLEIDPTIQKVRLEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGGQVKGSRKNNIDPIFDAYINSLKRQLDALQNDKLRLDGELRNMQDLVDDFKNKYEDEINKRTSAENEFVVIKKDVDAAYMGKVELEAKVDALTDELNFLRTFFEAELGELQAQISDTSVVLSMDNNRALDLESIIAEVKSQYEDIAKKSRAEAESVYQGKVQELQASAGEQGDVLRNTKSEISELNRKSQRLKAEIENVKKQIAKLQASITEAEERGDLVLKDAQSKLAELEAALQKVKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEEFRLNSDVNNVSISVISSGGKSSLGGGGGGSGAGFGFGSGGAAFGGSGGAAFGGSGGAAFGGSGVSFGSGGGGFSSSSSSFGGGVGSVRYSSSQSSYRS	Refseq >NP_001079053|larval keratin [Xenopus laevis] MSQYKQFSVRSVATSGKPGFSSFSVAKSGGGFGSASGGGSFGSRSLYNLGSRKVSSVSSASGGGYGSAAGGFGGRVSGFGGGVGGGGYGGAGGAFGGAGGAFGGAGGGGFGGAGFGGFGGAGFPGGPSAGIQEVTINQSLLAPLNLEIDPNIQRVRVEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQEQGGQVKGSRKSNTEPIFDAYVNNLKRQLDALQNDKLRLDGELRNMQDLVDDFKNKYEDEINKRTSAENEFVVIKKDVDASYMGKVELEAKVDALTDELNFLRTFFEAELGELQAQNSDTSVVLSMDNNRALDLESIITEVKAQYEDIAKKSRAEAESVYQDKVQALQASAGEQGDVLRNTKNEISELNRTAQRLKAEIGNVKKQIAKLQASITEAEERGDLVLKDAQTKLAELEVALQKAKQDMALQLREYQELMNVKLALDVEIATYRKLLEGEESRINSDVNNFSISVISSGGKSSLRGGGGGGSGAGFGFGSGGGGFGGSGGGAFSGSGGGAFGGSGGSAFGGSGLSFGSGGGGFSSSSSSFGGGVSSGVRFSSSKSSYRS

Genomic		tropicalis
Genome Browser		Xenbase JGI Ensembl UCSC			Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.5688 [+] Str.75496 Str.41796	Xl.56635
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	KRT5	OMIM:179850 OMIM:131960 OMIM:131800
mouse		MGI	Krt5	All(4) Targeted, knock Out(3)
zebrafish		ZFIN	krt5

Publications
First:		Temporal differences in the appearance of NEP-B78 and an LBR-like protein during Xenopus nuclear envelope reassembly reflect the ordered recruitment of functionally discrete vesicle types. [J Cell Biol 1999]
Most recent:		Induction of cytochrome P450 family 1 mRNAs and activities in a cell line from the frog Xenopus laevis. [Aquat Toxicol 2012]
		View All Papers

Functional Ontologies
GO: Molecular:		structural molecule activity
Biological:
Cellular Component:
EC:
KOG:		[DY] Nuclear envelope protein lamin, intermediate filament superfamily

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		StrJgi.2306.1.S1_s_at	Xl.71.1.S1_at
Affymetrix 2.0

Symbol legend[+]

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