Gene Symbol: apoa4 Gene Name: apolipoprotein A4 Synonyms: apolipoprotein A-IV Add Xenopus synonyms Gene Function: lipid transport Interactants:

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >BC081300|Xenopus tropicalis apolipoprotein A4, mRNA (cDNA clone MGC:89243 IMAGE:7018138), complete cds GTCCAGATCTGATCTACCCAGGGACTCAATATGCTGTTGAAGGTGACAACCCTCGCTCTGGTTTTATGTGCCATCACAGGCTCCCAAGCCGATGTCAGAACAGACCAAGCAGTCAGTGCTTTCTGGGACTATGTCTCCCAGCTGCAAAGCAGCACCAAGGATACGGTGGACCAGATCCAGCAGTCAGATATCACCAAACAACTTAATGTTCTCATACAGGATAAAATGAAAAGTATGAACCTTTATGCTGGAGAACTACAAAGCCAAGTAATTCCCTTTGCAAAGCAAATCCATGACCAACTAACACAAGATTCAGAGAAAATTCGAGAGCAGATACAACAGGAGCTGGAGCAGCTCAGGGTGAAGATTTCTCCTTACGCAGATGAAGTACATAAACAAGTGAACAAGAATTTGGAGGAGCTGCAGCTCAAACTGACTCCTTATGCTGAGGAACTGAAAAGCCAACTAGAGAAGAACACTAACACAATCAGTCAGCAACTTAGGTCTGTAGTTCAAGAAATGGATTCTAAGATTAGGGACAATGCAGGAAATTTGCAAGAATCTTTGGCACCATATTCAGAAAAACTCCAGGCCCAAATAGATGAGAGTGTAGACCAACTAAGAAAACAACTTAACCCTTACACTGATGAAGTGAGAGATAAGATTGGCCATCAAGTACAAAAGTTACGTGAGAGCCTGAGCCCTTATGCAGAGGAGATGCAGGAGAATTTAGCCAAGCAGATAGAGAGCATGGAATTCCAAATGAGAAAGAGTGTTGAGCAAGCAGACACCCAATTAAAACAGATCACTGAGCAGTTAAAAGCTCAACTGAGCCCCTATGCAGATGATCTGAAAGAGAAACTCCAGGTAAATGCTAGGGATGCTAAGCAGACACTAGAACCATATCTCACCGAGCTAAACCAGCAGATGGAGCAGAAGATTGCAGAATTTAAAGTTAGCATCACTCCCTATGGAGAGGCACTCAACAAGGCACTAGTGCAGAGGGTAGAGGACATGAAACTGAAATTTGGGAAATACACAGTGACTGTGCAAGATCAAATGGAATACTTAGAAAAAGACATCCGAGATAAGTTTAGCGACTTCATAAATAAAGGTATAACTGAAACTGAAAACTAAACAACGTATACACCCAAATTGTCATCAGACCACAGTATCCATTACAACTTGCACCACCTGTATGCCATATCAATCATAAAAAGAAAAAAAAATACCCAGAGATTGGGCTGTCGGCCTACTGCAAATCAAGTAAGAAGAAAATGTAAAAGTGAAGTAAATGCACACTGTAGCAAGTTTTGTAAAACACAGATTTGTCTTTGTGTTATGTCTGTCATTTGTTGTGCCTGAATAGCTTTATGTTTCTCTTACAGCCCTAAAATGTTCCATTTTATTTATAATTCTGCTGCCATTGTTTCTTGGTCATTATGTCTGGGATGAACCTCCCCAGTAACAACATAAGGCCCTGTAATGTTTTACGTTGTGGTTGATATGCATGCACTTTATCAATGCTTCTCAATAAAATGCAACCCAGCAATGCAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001094535|Xenopus laevis apolipoprotein A4 (apoa4), mRNA GGGGATCTCACATACAGATACCAAGTGACCAGATCTGACCTACCCAAGGACTCAATATGCTGTTGAAGGTGGCAACCCTCGCTTTGGTTTTATGTGCCATCACAGGCTCTCAAGCTGATGTTAGAACGGTCCAAGTGGCCAATGGTTTTTGGGACTATGTCTCCCAGCTGCAAAGTAGCACCAAGGATACGGTGGAGCAGATCCAGCAGTCGGATATCAGCAAACAACTTAATGTTCTCATACAGGAAAATATGAAAAGTGTGAACCTTTATGCTGGAGAACTACAAAGCCAACTCATTCCTCTTGCAAAACAGATCCATGACCAGCTCACACAAGATTCAGAGAAACTTCGAGAGCAGATACAACAAGAGCTGGAGAAACTCAGGGTGAAGATTTCTCCTTATGCAGATGAAGTACACAAACAAGTGAGCAAGAATTTGGAGGAGCTGCAGCTCAAACTGACTCCTTATGCAGAGGAACTGAAAAGCCAACTAGAGAAGAATACTAACACAATCAGTCAGCAGCTTAGGTCTGTTGTACAAGAAATGGATGCTAAGATAAGAGAGAATGCAGGAAATTTGCAAGAGTCTTTGGCTCCATATTCAGAAAAACTCCAGAACAAAATAGATGAGAGTGTAGATCAACTTAGAAAACAACTTAACCCTTACACTGATGAGGTGAGAGAGAAGATTGGCCATCAAGTACAAAAGTTACGTGAGAGCCTGAGTCCTTATGCAGAGGAGATGCAGGAGACTTTAGCCAAGCAGATAGAGAGCATGGAATTCCAAATGAGAAAGAGTGTTGATCAAGTGGACACCCAAATAAGAGAGTTCACAGAGCAGTTAAAAGATCAATTAAGCCCCTATGCAGATGAGCTGAAAGTGAAACTCCAAGTAAATGCTAGGGATGCAAAGCAGACACTTGAGCCATATCTCACTGAGATCAGCCAGCAGATGGACCAGAAGATTGCAGAATTTAAAGTTAGCATTACTCCCTATGGAGATGCTCTCAACAAAGCCCTAGTGCAGAGGGTAGAAGACATGAAGCAGAAATTAGGAAAATACACAGTGACTGTGCAAGATCAAATGGAATACCTAGAAAAAGATATTAGCGAAAAGCTTAGCGACTTCGTTAATAAAGGTCTATCTACTGAAAACACTTTATAGGCCCAAACTATTATCAGTCCATTACAACTTGCACCACCTGCATGTCATATCAATCTAAAAAAAACTGAATCCAGCTAGGAATCCCCACACCAAATGTGACTGCCAGCATACTGAAAAGAAAGTAAAAAGAAAATATAAAAGCTAGGAGAATGTGCACTGTAACAAGTTTTGTAATAATAAAGATTTGTGTCTGTTGGGACTGTTAACTAATGTTTCATTTTCAGAATAGGTTTATGTTAAAATTATACAATTGCCAACACTAAAAGGTGCCATTTTATTTCTAATTCCGCTGTACTTGTTTCTTTATCATTATGTCTGGTATGAAGCTCCAACAACATATAGCCATGTAATGTTTACCTTTCTTTCCAGAGTTGATATGCATGCAATTCATGAATGTGTCTCAATAAAATGCAACTCAGCAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		NCBI Protein >AAH81300|apolipoprotein A4 [Xenopus (Silurana) tropicalis] MLLKVTTLALVLCAITGSQADVRTDQAVSAFWDYVSQLQSSTKDTVDQIQQSDITKQLNVLIQDKMKSMNLYAGELQSQVIPFAKQIHDQLTQDSEKIREQIQQELEQLRVKISPYADEVHKQVNKNLEELQLKLTPYAEELKSQLEKNTNTISQQLRSVVQEMDSKIRDNAGNLQESLAPYSEKLQAQIDESVDQLRKQLNPYTDEVRDKIGHQVQKLRESLSPYAEEMQENLAKQIESMEFQMRKSVEQADTQLKQITEQLKAQLSPYADDLKEKLQVNARDAKQTLEPYLTELNQQMEQKIAEFKVSITPYGEALNKALVQRVEDMKLKFGKYTVTVQDQMEYLEKDIRDKFSDFINKGITETEN	Refseq >NP_001088004|apolipoprotein A4 precursor [Xenopus laevis] MLLKVATLALVLCAITGSQADVRTVQVANGFWDYVSQLQSSTKDTVEQIQQSDISKQLNVLIQENMKSVNLYAGELQSQLIPLAKQIHDQLTQDSEKLREQIQQELEKLRVKISPYADEVHKQVSKNLEELQLKLTPYAEELKSQLEKNTNTISQQLRSVVQEMDAKIRENAGNLQESLAPYSEKLQNKIDESVDQLRKQLNPYTDEVREKIGHQVQKLRESLSPYAEEMQETLAKQIESMEFQMRKSVDQVDTQIREFTEQLKDQLSPYADELKVKLQVNARDAKQTLEPYLTEISQQMDQKIAEFKVSITPYGDALNKALVQRVEDMKQKLGKYTVTVQDQMEYLEKDISEKLSDFVNKGLSTENTL

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.26776	Xl.68768
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	APOA4
mouse		MGI	Apoa4	All(2) Targeted, knock Out(2)
zebrafish		ZFIN	apoa4

Publications
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Functional Ontologies
GO: Molecular:		lipid binding
Biological:		lipid transport lipoprotein metabolic process
Cellular Component:		extracellular region
EC:
KOG:		[KRT] Predicted DNA-binding transcription factor, interacts with stathmin

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.26776.1.A1_at
Affymetrix 2.0			Xl2.24534.1.S1_at

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