Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (15) Nucleotides (703) Proteins (67) Interactants (42) Wiki
XB-GENEPAGE-942719
Gene Symbol:
caprin1

Gene Name:
cell cycle associated protein 1

Synonyms:
rng105 ( Add synonyms , Nomenclature history )

Gene Function:
Positive cofactor 2 (PC2), subunit of a multiprotein coactivator of RNA polymerase II

Protein Function :


InterPro :
Caprin-1 C , Caprin , Caprin-1 dimer , Transc factor DP C [+]

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-942720 XB-GENE-17345186 XB-GENE-942726
Gene Symbol caprin1 caprin1.L caprin1.S
Chromosome Chr4 chr4L chr4S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 594938
100653491
379865
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine caprin1 caprin1.L caprin1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards CAPRIN1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Caprin1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Caprin1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR caprin1a caprin1b ZFIN Ensembl
chicken
GEISHA CAPRIN1 Ensembl
fruit fly
worm
Publications
First A novel RNA-binding protein in neuronal RNA granules: regulatory machinery for local translation., J Neurosci 2005                
Most Recent
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 15 terms 4 terms 4 terms
PANTHER caprin1
KEGG Pathways K18743 K18743 K18743
KOG [K] Positive cofactor 2 (PC2), subunit of a multiprotein coactivator of RNA polymerase II
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks caprin1
Antibodies caprin1 Ab1 caprin1 Ab1 caprin1 Ab1
ORFs caprin1.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.16.0
Major funding for Xenbase is provided by grant P41 HD064556