atp5a1 Summary [species: Xenopus laevis and Xenopus tropicalis]

Summary

Expression

XB-GENEPAGE-944566

[provisional- machine annotated only]

Gene Symbol: atp5a1 [Predicted: Source is Human Entrez Gene]

Gene Name: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle [Predicted: Source is Human Entrez Gene]

Add Xenopus synonyms

Gene Function: F0F1-type ATP synthase, alpha subunit

Interactants: gdf1(1) , myc(1) , not(1) , pax6(1) , shroom1(1) , shroom2(1) , shroom3(1) View All

XB-GENE-944567

XB-GENE-944572

Molecules	tropicalis	laevis
Gene	JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
	Entrez Gene	Entrez Gene
mRNA	Refseq >NM_001030439\|Xenopus (Silurana) tropicalis ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle (atp5a1), nuclear gene encoding mitochondrial protein, mRNA CGGAGAGGCGGACACGGCACATCCATCTGCAAGCAGCAACCCGAGTCCCAAGCCGCAGCCATGCTGTCAGTCCGTGTAGCCACCGCGCTGGCCCGCACCCTGCCCCGACAGGCAGGCCTGGTGTCCAAGAAAGCCCTCGGTGCTGCTTTTGTTGCAACCAGAAACATTCATGCATCTGGCGCATGGCTCCAGAAGTCCGGCACCGCTGAAGTGTCCTCTATCCTTGAGGAGCGTATCCTTGGTGCTGACACCAGCGCTGACCTAGAGGAGACCGGACGTGTCCTTTCCATTGGTGATGGTATTGCCCGTGTCTATGGGCTTAGGAATGTCCAGGCTGAGGAGATGGTGGAATTCTCATCTGGCCTGAAGGGCATGTCTTTGAACTTGGAGCCTGACAATGTTGGTGTTGTGGTGTTTGGTAACGACAAGCTCATTAAGGAAGGTGACATTGTGAAAAGGACAGGGGCTATTGTGGATGTGCCAGTTGGTGATGAACTGCTGGGTCGTGTTGTGGATGCTCTCGGTAACGCTATTGATGGCAAAGGTCCCCTTGCATCTAAAATCCGCAGGAGGGTTGGTCTGAAGGCCCCAGGCATCATCCCCCGTATCTCTGTGAGGGAACCCATGCAGACTGGCATTAAGGCTGTTGACAGTCTGGTGCCCATTGGCCGTGGCCAGCGTGAGCTGATCATCGGTGACAGACAGACTGGCAAAACCTCCATTGCTATCGATACCATTATCAACCAGAAGAGGTTCAACGATGGAACTGATGAGAAGAAGAAACTGTACTGTATCTATGTGGCCATTGGTCAGAAGAGGTCCACCGTGGCTCAGCTGGTCAAAAGACTGACTGATGCAGATGCCATGAAGTACACAATTGTGGTGTCTGCTACAGCCTCTGATGCTGCTCCCCTGCAATACCTGGCTCCATATTCTGGCTGTTCCATGGGAGAGTATTTCAGAGACAATGGAAAACACGCTTTGATCATCTATGATGACTTGTCCAAGCAGGCTGTTGCCTACCGTCAGATGTCTCTGCTGCTGCGTCGTCCTCCCGGTCGTGAGGCCTACCCCGGGGATGTCTTCTACCTGCACTCCCGTCTTTTGGAAAGAGCGGCTAAAATGAACGACCATTTTGGAGGCGGCTCCCTGACTGCTCTCCCCGTCATTGAAACACAGGCCGGTGATGTGTCTGCTTACATCCCAACCAACGTCATTTCCATCACTGACGGACAGATTTTCTTGGAGACAGAGTTGTTCTACAAGGGTATCCGACCTGCTATCAATGTAGGTCTGTCTGTGTCCAGAGTGGGATCAGCTGCTCAGACCAGAGCCATGAAACAGGTGGCTGGTACTATGAAGCTCGAGTTGGCTCAGTACCGTGAAGTTGCTGCTTTTGCTCAGTTCGGCTCTGATTTGGACGCTGCTACCCAACAACTCCTGAATCGTGGTGTGCGTCTCACTGAGTTGCTGAAACAAGGGCAGTACGTTCCCATGGCCATTGAAGAACAGGTAACAGTTATTTATGCCGGTGTCAGAGGACATCTTGACAAGATGGAGCCCAGCAAAATCACAAAGTTTGAGAATGCTTTCCTCGCTCACGTCAAGAGCCAGCACCAGGAGCTTCTTGCTACAATCAGGGCTGATGGAAAGATCTCCGAACAGGCCGACGCCAAACTCAAAGAAATCGTTCTAAGTTTCCTGTCCACATTCGAAGCATAAATTCCGTTTTTCTGCCACCAGTTTGTGATGTCGCTGTTCCCAATTGTTCTGGTTTTCATCCTCGCTAAACTTATTGAAGCACTTGTGCTTTTAATGTACAGAAATATCTCTAATGGAGAGTAAACTTTCATGAAAATTTAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001087777\|Xenopus laevis ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle (atp5a1), nuclear gene encoding mitochondrial protein, mRNA GTAACATCCACCCGCAAGCAGTCACCAGACTCCCAAGCCGCAGTCATGTTGTCAGTCCGTGTAGCCGCCGCGCTTGCCCGCGCCTTGCCTCGTCAGTCAGGCCTGGTGTCCAAGAAAGCCCTCGGTGCTGCTTTTGTTGCAACCAGAAACATTCATGCATCTGGCGTGTGGCTCCAGAAGTCTGGCACTGCTGAAGTGTCGTCTATCCTTGAAGAGCGAATCCTTGGTGCCGACACCACTGCAGACCTAGAGGAGACTGGACGTGTTCTTTCCATTGGTGATGGTATTGCCCGTGTCTATGGGCTCAGGAATGTCCAGGCAGAAGAGATGGTAGAATTTTCCTCTGGCCTGAAGGGCATGTCCTTGAACTTGGAGCCTGACAATGTTGGTGTTGTGGTGTTTGGTAATGACAAGCTTATTAAGGAAGGTGACATTGTGAAGAGGACAGGAGCTATTGTGGATGTGCCAGTCGGTGATGAGCTGCTGGGTCGGGTTGTGGATGCTCTGGGTAACACTATTGATGGCAAGGGCCCTATTGGATCTAAAACTCGCAGGAGAGTTGGTTTGAAGGCCCCAGGCATCATTCCCCGTATCTCTGTGAGGGAACCCATGCAGACTGGTATTAAGGCTGTTGACAGTCTGGTGCCCATTGGCCGTGGTCAGCGTGAGCTCATTATCGGTGACAGACAGACTGGCAAAACCTCCATTGCCATCGATACCATTATCAACCAGAAGAGATTCAACGATGGAACTGATGAGAAGAAGAAGCTGTACTGTATCTATGTGGCCATTGGGCAGAAGAGATCCACTGTGGCTCAGCTGGTCAAGAGACTGACTGATGCCGATGCCATGAAGTACACCATTGTGGTGTCTGCTACAGCCTCTGATGCTGCTCCCCTGCAATATCTTGCTCCATACTCTGGCTGTTCCATGGGAGAGTATTTCAGAGACAATGGAAAGCACGCTTTGATCATCTATGATGACTTGTCCAAGCAGGCTGTAGCCTACCGTCAGATGTCTCTGTTGCTGCGTCGTCCTCCTGGTCGTGAGGCCTACCCTGGGGACGTCTTCTACCTTCACTCCCGTCTTCTGGAAAGAGCAGCCAAAATGAACGATCACTTTGGAGGCGGCTCCCTGACTGCTCTCCCTGTCATTGAAACCCAGGCCGGTGATGTGTCCGCTTACATCCCAACCAATGTCATCTCCATCACTGACGGACAGATTTTCTTGGAGACAGAGTTGTTCTACAAGGGTATCCGGCCTGCTATCAACGTGGGTCTGTCTGTGTCCAGAGTGGGATCAGCTGCTCAGACCAGAGCTATGAAACAGGTGGCCGGTACAATGAAGCTGGAGTTGGCTCAGTACCGTGAAGTTGCTGCTTTTGCCCAGTTCGGCTCAGATTTGGATGCTGCTACACAACAACTCCTGAACCGCGGTGTGCGTCTGACTGAGTTGCTGAAGCAAGGACAATACGTTCCCATGGCCATCGAAGAACAGGTAACCGTAATCTATGCCGGTGTCAGGGGACATCTTGACAAGATGGAGCCCAGCAAAATCACAAAGTTTGAGAGCGCTTTCCTTGCTCACGTTAAGAGCCAACACCAGGAGCTTCTTGCTACAATCAGGGCTGATGGAAAGATCTCCGAACAGGCCGATGCCAAGCTCAAAGAAATCGTCCTAAACTTCCTGTCCACATTCGAAGCATAAATTCCGGGTTCTGCCACCAGTTTGTGATGTCACTGTTCCCAATTGTTCCTGGTTTTCATTCTTGCTAAACTTATTGAAGCACTTGTGCTTTTAATGTACAGAAATATCTCTAATGGAGAGTAAACTTTCATGAAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein	Refseq >NP_001025610\|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle [Xenopus (Silurana) tropicalis] MLSVRVATALARTLPRQAGLVSKKALGAAFVATRNIHASGAWLQKSGTAEVSSILEERILGADTSADLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPLASKIRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGVRGHLDKMEPSKITKFENAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLSFLSTFEA	Refseq >NP_001081246\|ATP synthase subunit alpha, mitochondrial [Xenopus laevis] MLSVRVAAALARALPRQSGLVSKKALGAAFVATRNIHASGVWLQKSGTAEVSSILEERILGADTTADLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNTIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGVRGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLNFLSTFEA UniProtKB

Genomic	tropicalis
Genome Browser	Xenbase	Xenbase JGI Ensembl UCSC	Xenbase

Synteny	Metazome

Expression	tropicalis	laevis
UniGene	Str.2749 [+] Str.46506	Xl.8876 [+] Xl.25166 Xl.57247
Unigene EST Profile	EST Profile	EST Profile
GEO data		GEO
Images	1 expression image(s) for tropicalis and laevis

Orthology	MOD	Entrez Gene	Genetic Phenotypes	Morphants
human	OMIM:Gene, HGNC	ATP5A1
mouse	MGI	Atp5a1	All(2) Targeted, other(2)
zebrafish	ZFIN	atp5a1

Publications
First:		The shroom family proteins play broad roles in the morphogenesis of thickened epithelial sheets. [Dev Dyn 2009]
Most recent:
		View All Papers 1 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		ATP binding hydrogen ion transporting ATP synthase activity, rotational mechanism hydrogen ion transporting ATPase activity, rotational mechanism More[+] hydrogen-transporting two-sector ATPase activity hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Biological:		ATP synthesis coupled proton transport
Cellular Component:		proton-transporting two-sector ATPase complex
EC:		H+-transporting two-sector ATPase
KOG:		[C] F0F1-type ATP synthase, alpha subunit

Reagents	tropicalis	laevis
Clones	open biosystems	open biosystems
	geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0	Str.2749.1.S1_at [+] Str.2749.1.S2_at Str.46506.1.A1_at	Xl.8876.1.S1_at
Affymetrix 2.0		Xl2.8876.1.S1_at

Symbol legend[+]