spsb1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Gene Literature (0)

Nucleotides (328)

Interactants (0)

XB-GENEPAGE-944620

[provisional- machine annotated only] Gene Symbol: spsb1 [Predicted: Source is Human Entrez Gene] Gene Name: splA/ryanodine receptor domain and SOCS box containing 1 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: SOCS box protein SSB-1, contains SPRY domain Interactants:

XB-GENE-944621

XB-GENE-6077923

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >XM_002936557\|PREDICTED: Xenopus (Silurana) tropicalis splA/ryanodine receptor domain and SOCS box containing 1 (spsb1), mRNA CGAGATTGTGACGCCAGTCAGGGAGAGCTGGACTGCAGGAGCGGAGGAGCTAGGCATTTAAACGGCGATCCGGGAGTGCGGGCTGTGTTATGAAACCGGGGCTGTCCCGCGGAAAGCGGGACTATTGGGCGGTGAAGTGGTAAAACTGAACTGAGTTCTCTGTTGCTTCAGTTCCTTGGAAGGAGGGAAACGTGAAGGCTGGCCAGCTGAATGACCTTGTTGTTGGCTCCTTAAAGTGAAATCGGTTTGTATCATGGGTCAGAAAGTCACAGGAGGTATAAAGACAGTAGATATGAGGGACCCTGCATATAGACCACTAAAGCAAGATCTACAAGGGCTTGATTACTGTAAGCCTGCAAGACTCGACCTTTTATTAGATATGCCTCCAGTGTCCCATGAAGTACAGCTTCAGCACTCCTGGAATAACAATGATCGCTCGCTAAATGTGTTTGTGAAGGAGGATGACAAACTTGTCTTTCACCGGCATCCGGTGGCACAGAGCACAGATGCTATTCGTGGCAAAATTGGTTACACACGTGGCTTGCATGTTTGGGAGATTACCTGGGTTATGCGGCAGCGAGGGACTCATGCTGTTGTTGGAGTAGCTACAGCAGATGCACCTCTACATTCTGTTGGCTATACAACACTTATAGGCAGTAATGGCAAATCTTGGGGCTGGGACCTGGGCAGGAATAAACTATATCATGATGGGAAAAATCAGCCAAGTAGAACATACCCTGCGTTTCTGGAGCCTGATGAAACATTTATTGTCCCAGATTCCTTCTTGGTGGTACTTGATATGGACGATGGCACACTTAGCTTTGTTGTGGATGGACAATACATGGGAATAGCTTTTCGAGGACTAAAGGGAAAAAAACTTTATCCTGTTGTAAGTGCAGTGTGGGGTCACTGTGAAATAAAGATGCGATACTTAAATGGACTTGACCCTGAACCACTTCCACTGATGGATCTGTGTCGAAGATCTGTTCGCCTTGCATTGGGAAAAGACAGACTGAACGAAATACAAGCTCTTCCACTACCGGCTGCACTTAAAGGCTACCTACTTTACCACTGACATATGCAGAGATCTTCTGCCTATAGTAATCTATACAGTGCTATGCATTCTGAGGCTACAATCCTTTGACCTACACTGCATCGATGTTGGATGTAGTGCTATCCCTCTGCGCTGCTCGAATGCATGCTACAGACTACCAGTACCTCCAAGTTTTTGCCCTGGAGTTTTTGGATTTCCTAACTGGGCGTTTTCTGTGAAGGATATTTAGTAATGCAACTGTGTTCTGCAGGCCTAACACAAGAACAGGGTTGCTTTTACATCTCTAAATGGGAAGTATATATCCTTTTCAGGGAAACCGTCCAAATTCTGCATTGTTTTTTATATGTACCTGTCTGATTTGTATGTCTGTCTAACAGTAGTTGTGCCTCTAAATATTAAGTTGGAGACTGTGGCAAAACAAGAATACCAGAAGGGCAGTTTTACTTTTAACAAAATGAGTTTTGTAAACACAAATCATGGATTTTTTTTTTCAAATGCTTTCTATAAATATATATATATATATTCAATTCTATGGAATTTTTGAAGCTTATTTATAAATGGGTGAAACTTAGAACTCACTGTTTGATCAATACACTTCTACAAATCCCATAGGAATGAATAGAAAGTTGGTGGGTTTTTATTAAGCTCTAAACTCGCGTTTTGATCGGCCCTATGTGTTCCATTTGACAACATTGGTGTTTCTCACCTTTCTCCCCAGAATGTATCTCCCAAATGTGTTTAAACAATTTAGAACCATGGCACCTATCGGCATTTTTTAACATAATAAAGGGTAAAAGCATGCTGGGAGTTGTAGTCCAGTTACACCTGATGTGAAAGTACCTTAGGAACTGACTTTAGCCAAAAAAGTCAAACTGTAAATAGAAAGCAATTGAAAAATGTGGTGTAGTGTTTAAACGACTATGTATTGGGCCTGTAAACTGAATCTTTTCCACCCAATACAGGGCTGGTGGTTCACTAGAGTATTTCCCATTCATTAACTTCTGTTTGCATTTAATCTTCATAGCGCAATAGGGTTCATGGAAGACCCCTGTGGTTGACTTTTGCCTAATTTAGATTTGTTCACTTTTTTCCTTTTGAAAGTCACTGAATTCCTGGAATGATCTCCAAATAAAGGGTACATACAGCATATGCCAGTTATTATAGCACCCAAATGTTTGTCTTAGAAGTTATGCCATAAGCTTTAGACTCGGTTTGGATAGTGTCTACATGTTGTCATTGAATGTCTACAACCTGGAAATTGTTCCATGCACATGCAAATTGGAGAGGATCAGTGTTTCCACAAGTCAAATGTAAATGTCATGTGTGAAATAGCCTGGTAGGCAGAGGTAAGCAGTTGGATAGCCCCCATTCATATGCGAAATAGAATTGTGCAGAGAGGGTTTTATAATAGTAAGTAATCGGTTGTTGGGATTAAATGAAGGAAAAGCGCTAGCCATGCAACGCTTCACTGCCACCTTTACTTCATAGCACCCCTTCCCTAAAAGCCACATCTAGGCATGAAGGTTTAACCAAATGCAAAGCTTTATTCAGTTGCAAATTGATTAGTCACTTTAGTACATAAACCCAGCTGATGCATCAGTTCTCAGGAACTTCTCCCAGAAACCAAAATCCCCCTTTTTTTGTATTATGGGCCATTTGTTCAAGATGAATTAAGTTAAGACAACTTTTTATGTACAGGTACAATAGCTGGATGTGTGACTTTTTAATGTTGAATTGATGTATGTAGGAGTGTGAATATATTTTAATTGCTGCTGTAGGGTACTTTAAAGACCAAGAAGACATCTATCTTCTAAGGTGCACAATGGTGCCAAGGCTGAAAGGGTACGTCAGGTGCCATCTTTAACTCCCTGTAAGCTGTTTTCTTGCTGGATTAGGACACTTGCAGTATTGCACAATTAGGAGGGAACTGTAAGGAAAATATAGTTGCTGCCTTTTATTTTATTTGTGCAAGTAGTCTTCCAACCTATAGAAAAGTGGCTTAGTATTTCTCCCTACTGTCTTCAATTTGTACAGTTTTAATCCTTTTATAAAATCTGTAGATAAAAATGTGTAATAAAGAAATAGTTTATTAAATATAAAGCCTCTCCTGTTTTTATTAGGCTTCCATGAAGCAACTTTTGCAAATGTGTTTTTTTTTTAGATATCTCTTAAACACACATTAAACATTATATTTACATGT	Refseq >NM_001086733\|Xenopus laevis splA/ryanodine receptor domain and SOCS box containing 1 (spsb1), mRNA CGGACGCGTGGGCAGAGCAGAAGCGGAGGAGCTGAACATTTAAACGGCGTTCCGGGACTGTGGGCTGTGTTATGAAAACGGGGCTGTCCCGCGAATTGCGGGACTGTTAGGCGGTGAAGTGGTAAAACTGAACTGAATTCTCGGTTGCCTCTGCTTTTCATTGGACAAAAGGAAACTTGAGGACTGGCCAACTGAAAGACCTTGTATTTGGCTCTTAAAATTAAATCCGTTTTATATCATGGGTCAGAAAGTCACAGGTGGTATAAAGACTGTAGATATGAGGGACCCTGCATATAGACCACTAAAGCAAGATCTACAAGGGCTTGACTACTGTAAACCTGCAAGACTGGACCTTTTATTGGATATGCCTCCAGTTTCCCAAGAAGCACAGCTTCAGCACTCCTGGAATAACAATGATCGCTCGCTAAATGTGTTTGTCAAAGAGGATGACAAACTTGTCTTTCACCGGCATCCGGTGGCACAGAGCACAGATGCTATTCGGGGCAAATTTGGTTACACACGTGGCTTGCATGTTTGGGAGATTACCTGGGTCATGCGACAGCGAGGGACTCATGCTGTAGTTGGAGTGGCTACAGAGGATGCACCGCTTCATTCTGTTGGCTATACAACACTTATAGGCAGTAATGGCAAATCTTGGGGCTGGGACCTGGGCAGGAATAAACTATATCATGATGGCAAAAACCAGCCAAGTAGAACATACCCTGCATTTCTGGAGCATGACGAAACTTTCATTGTCCCGGATTCCTTCTTGGTGGTACTTGATATGGATGATGGCACACTTAGCTTTGTGGTGGATGGACAATACATGGGAATTGCTTTCCGAGGACTAAAGGGAAAAAAACTTTATCCTGTTGTAAGTGCAGTGTGGGGTCACTGTGAAATAAGGATGCGATACTTAAATGGACTTGACCCTGAACCACTTCCACTGATGGATCTGTGTCGAAGATCTGTTCGCATTGCTTTGGGAAAAGACAGACTGAACGAAATACAAGCTCTTCCACTACCAGCTGCACTTAAAGGCTACCTGCTTTACCACTGACACATGCAGGGATCGTCTGCCTATAGTAATCTATACAGTACTATGCATTCTGAGGCTCCAATCCTTTCACCTACACTGCCTCACTGTTGGGTGTAGCGCTACTATCCCTCTACACTGCTCAAATGCATGCTACAGACTTCCAGTACCTCCACATTTTTGCCCTGGAGTTTTTGGATTTCCTAATTGCACCTTTTATGTGAAGGATATTTAGTAATACAAGGATTTGCCGTGGGCCTAATAAAAGAACAGAGTTGCTTTTAAATTTCTAAATGGGAACCGTCCAAATTCTGCATTCTCCAATTTCTTTTTTTTTTTATGTACCTGTCAAATTTGTATGTTTGTCTGTCAAATAGCAGTTGTGCCTCTAAATATTAAGTTCAAGACTGTGGCAAGCATACCTAAAGGACAAGTGACTTAACAATTTTTCTTTTCCCCTACTGGTTTTTCAGGAATATTATCTTTTTAGGATCCTGTTTTCGACCTTCCTAGTAGTCCCTTAGTAAGCGATCTGTTCTAATTTGATACATGAGCTGATATATTGCTGAGCAGCCGCAGCCCTTGCTCAGCATGGTTGCAGGACATTACTATAGTAACACAGTAAGTGGTAACTTACAACATTAGCATTTGGCTACTGCTCAGTTTATCGACCTAATGTGTTAAACATTCTAATCTAAGTTAGATCATTGGATCTAATGTGTTTTTTTTTTTACACATTAGTTTGATAAACTGAGCAGCAGCTGCCAAACAACAATGTTGTAAGTTACCACTGTGTTATTGTGGTGATGCTCGGTGGCCATGTTCAGTGAGGGCTGAGGCTGTTGAGCAATGTATCCGCTCGTGTGTTAAATTAGAACAAATCTAAAAAAAAAAAAAGGATCCAATGTTCTAAATTTTTTTAACAAAATCAAGACTAAAGCATGCTGGGAGTTGTAGTCCAGAAACATCTGGTGACCCAAGGTGTCTAGAACTTGCACAAGAGGGAGGAAAAATCATTTTAAAGCTAAATATTCCAAAAACTGTAGACCGAAAGCAATTTAAAAACATGTGCTGTCTAAAATGTCCTTGTTTAGTGTCTTACTCTTAAGTTGGTGGTCTGTAAACTGAGCAACAGCCTTGCTTGTGTCCCACCCTAGTATAGGGCGAGTGGGTGCACTGCTGTGTAACATGGAAAGTATATTTCCTATTCATAAACATGTTTTCATTGATCATCATAGCCTATAGGGTACATGGAGCTCCCTGCTGTTAATTTGCATCAGTATGTATGAGTGGATCTATCTTGTTACTTGCTTAGCTTTGTTACTGCAACTTTAAAGTCTCAGAACACCTGCAATGGCTTCCAAATAAAGGGTACATAGAGAACCTTGCACTATGCAGTCAGGGGTGGTTCCAGTCATTAGATGTAAGCAATAAGATAGCTCCCATTCATATGCAACTGTGAATTGTGCAGAGATGGGATGTTCTAGTACACGGCTGGAAGAATTGTGAAGGAAAAGCCCCAGTTATGGAATTCTGCCATCTTTTCTCTTCTCCAGAGCACCCTTTTTCCACCAGCCACACCTAGGCAAGATGGGGGTGTAAGCCATTAAGCAGCAGATTAATCAGTGTCCTTTGTACTTAAACCCAATTAATGCAGCGGGTACTACAGTTTTCTGCTTCAGTGTTATGGTGAAATATTGGGTGGCAGTTTCCTAAAGACTGCAGCAATTGCCAGTTCTCAGGAACTTCTCCCACAAACCAAAATCTCAGATACCTCTCTCCCCTTTTTTGTATGACCGTTTTGTTCAAAATGAATTTAAATTAAGACATCTGTTTATGTACAGGTACAATGGCTGGATGTGTGACTTTTAATGTTGAATTAATGTATGTAGGAGTGTGAATATATTTTAATTGCTGCTGTAGGGTACTTAAAGTCCAACAAGACCTTTTTCTTCTAAGGTGCACAATGGTGCCAAGGCTGTAAGGGTACGTCGGTGCCATCTCTTAACTCCCTAAAAGCTGTTTTCTTGCTGGATTAGGACACTTGCCGTATTGCACAATTAGGGGGGAACTGTAAGGAAAATATAGTTGCTGCCTTTTATTTTATTTGTGCAAGTAGTCTTCCAACCTACAGAAAAGTGGCTTAGTACGTCTCCCTACTGTCTTCAACTTGTTTGTACAGTTTTAATCTTTTTTATAAAATCTGTAGATAAAATGTGTAATAAAGAAATAGTTTATTAAATTTAAAAAAAAAAAAAAAAA
Protein		NCBI Protein >XP_002936603\|PREDICTED: SPRY domain-containing SOCS box protein 1 [Xenopus (Silurana) tropicalis] MGQKVTGGIKTVDMRDPAYRPLKQDLQGLDYCKPARLDLLLDMPPVSHEVQLQHSWNNNDRSLNVFVKEDDKLVFHRHPVAQSTDAIRGKIGYTRGLHVWEITWVMRQRGTHAVVGVATADAPLHSVGYTTLIGSNGKSWGWDLGRNKLYHDGKNQPSRTYPAFLEPDETFIVPDSFLVVLDMDDGTLSFVVDGQYMGIAFRGLKGKKLYPVVSAVWGHCEIKMRYLNGLDPEPLPLMDLCRRSVRLALGKDRLNEIQALPLPAALKGYLLYH	Refseq >NP_001080202\|splA/ryanodine receptor domain and SOCS box containing 1 [Xenopus laevis] MGQKVTGGIKTVDMRDPAYRPLKQDLQGLDYCKPARLDLLLDMPPVSQEAQLQHSWNNNDRSLNVFVKEDDKLVFHRHPVAQSTDAIRGKFGYTRGLHVWEITWVMRQRGTHAVVGVATEDAPLHSVGYTTLIGSNGKSWGWDLGRNKLYHDGKNQPSRTYPAFLEHDETFIVPDSFLVVLDMDDGTLSFVVDGQYMGIAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDLCRRSVRIALGKDRLNEIQALPLPAALKGYLLYH

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.51699	[+] Xl.2813 Xl.7619
Unigene EST Profile		EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	SPSB1
mouse		MGI	Spsb1	All(3) Gene Trapped(1) Targeted, other(2)
zebrafish		ZFIN	spsb1

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		sugar:hydrogen symporter activity
Biological:		intracellular signaling cascade phosphoenolpyruvate-dependent sugar phosphotransferase system
Cellular Component:
EC:
KOG:		[R] SOCS box protein SSB-1, contains SPRY domain

Reagents		tropicalis	laevis
Clones		open biosystems
		geneservice/RZPD imagenes
Affymetrix 1.0		Str.47791.1.A1_at [+] Str.16969.1.S1_at	Xl.7619.1.S1_a_at [+] Xl.7619.1.S1_at Xl.7619.2.A1_at
Affymetrix 2.0			Xl2.7619.1.S1_at [+] Xl2.7619.2.A1_at Xl2.2813.1.A1_at

Symbol legend[+]