ubl3 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (0)

Nucleotides (213)

Interactants (0)

XB-GENEPAGE-951597

Gene Symbol: ubl3 Gene Name: ubiquitin-like 3 Synonyms: hcg-1, pnsc1 Add Xenopus synonyms Gene Function: Interactants:

XB-GENE-951598

XB-GENE-951601

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001114268\|Xenopus (Silurana) tropicalis ubiquitin-like 3 (ubl3), mRNA GAGACGATATGACAGGAAGGAGAAACTGCTGATCGGAGCGCCGGCTGCAAGTCACACGGGAGAGGGGAGCAGGAGAGCCTACGAGCCGCAAGGGGGGCCCAGCTAGTGCGTTCCCGTTGAGCCGCTGCCCTGCAGTCTTGCTTCGGTCGGGAGCTGCGGAGAGTGGGGTGACGCATTTGTGGGGTTCGGATGTGACGGTGAGGAGATCTCTCCGGGATCCCTTGGTTCCGTTACTGGGCGGAAGAGAGAATTGAGTGTAGTGGCGCTTCCCTGCTGCGCCTTCCTGTCGCCCTTCTCTCCTCGCCCCCCGGAGCCTGCGGAGTGAAACTTTATCCCTATAGCTGGGGGGGAGGCTCCGCGTATCGCACAGCCTTGTGTCCCACAGCCTTCGTCTCCCTCCCCCACCAGCCTTCCCTCCCCCAGTGTGTGTGTGTAGTGCCCGCAGCCCGGTATCCGGAACCCGCATGTCCCAGCTGGTCTGTGTGCGCAGCACCCCCGGGCCCCGCTAGATCTACCCGCCCCCCCTTTGGATTTAACTGGGACATTGTGACACTCAATATCGCCCGGCCTTGCCCCCCCTACGGCTGCCGAGATGTCCAGCTCCGTCCCAGCGGATATGATTAATTTGCGCTTAATCTTAGTAAGCGGCAAGACAAAAGAGTTCCTGTACTCACCGAATGATTCGGCGGCAGATATTGCTAAGCACGTATATGATAATTGGCCCATGGATTGGGAGGAGGAACAAGTCAGCAGTCCAAATATACTTCGGCTTATATATCAAGGACGATTTCTTCACGGCAATGTGACTTTAGGAGCCTTAAAACTTCCCCTTGGCAAGACAACAGTGATGCACTTGGTCGCCAGAGAGACATTGCCAGAGCCAAACTCTCAAGGTCAGAGAAACCGCGAGAAGACCGGGGAGAGCAATTGCTGTGTAATCCTGTAAATCCCGACGTGTCTGCGAAGTGTGATGTAATATAGTCTTTGTCTTTCATGCTGCTGGAATAGAGGAGACCATCGCTTCACAGATCCTTAGAACAACAACCCGTCCGTCTCTCCATGGACCTTAGACATGACAAGAACACGTTCATAGAACTCTTTTCTCAAGAGATCCAGAACATTCATTCTGACTTTTTATTTTCTTGCAGAGTAACTTTGTATGTCGTAGTATTTTCATTTCTGAATGCATTCAGTCTCCGGGGTGGGGGTGGGGAAGGAAACAAAAAAAAAAAAAAA	Refseq >NM_001092437\|Xenopus laevis ubiquitin-like 3 (ubl3), mRNA CTACGAGCCGCGAGGGGGGTCCTTTTTAGTGCGTTTCCGTTTGACCTTCTTCCGCCCTGCAGTTTTGCTTCGGTCGGGCGCTGCGGAGAGCGGGGGTGACGCATTTGTGGGGTTCGGATGTGGTGGTGGAGATTCCTTGGTTAAATTACTGTGCGGAAGCGAGAATTTTGTTTCCAGTTGCGCCTTCTTCTTTCACTTCTCACCTCACCCCCGGAGCCTGCGGAGTGAAACTTTATCCCTATTGCTGGGGGGGGAGGCTCCGCGTATCATAGAGTCGTGTTGTGCCCCGGAGCCATTGTCTCCCTCCCCCGCCAGTCAGTGTGTGCTGTACCCGCAGCTCGGTGCTCTCAGGAACCCGCATGTCACCGCTGGTCTGTGTGCGCAGCACCCCGAGGCCCGTCTGACATCTACCCTCCCCCATTTTGGATTTAACTGGGACCTTGTGACTCTCAATATCGCCTGGCCTTGTCCCATCAACTCCTGCCGAGATGTCCAGCTCTGTCCCAGCCGATATGATCAATTTGCGCTTAATCTTAGTAAGCGGGAAGACAAAAGAGTTCCTGTACTCACCGAATGATTCGGCAGCAGATATTGCTAAGCACGTATATGATAATTGGCCCATGGATTGGGAGGAGGAACAAGTCAGCAGTCCAAATATACTTCGTCTTATATATCAAGGACGGTTTCTTCACGGCAATGTGACTTTAGGAGCCTTAAAACTTCCCCTTGGCAAGACAACGGTGATGCACTTGGTCGCTAGAGAGACATTGCCAGAGCCAAACTCTCAAGGTCAGAGAAACCGCGAGAAGACCGGGGAGAGCAATTGCTGTGTAATCCTGTAAATCCCGATGTGTCTGCAAAGTGTGATGTAATATAGTCTTTGTCTTTCATGCTGCTGGAATAAAGGAGACCATTGCTTCCCAGATCCTTAGAACAACAATAACACCAACCCGTCCTTCTCTCCATGGACCTTAGACATGACCAGAACTCTTTTTCTCAAGAGATCCAGAACACTTTTTATTTCCTCGCAGAGTAACTTTGTAGTATGTTGTAGTATTTTTCATTTCTGAATGCGTTCAGTCTCCTTGGCGAGTGGGGAAAGTCAATAGGTTCACTAATAACGATATCGTTCTTGCTGCATCAGGAAAAAAAAAGTCTTCAGTGGATTTAGGCTCAGGTCGCACTATTAAACGGAGAAATAATTGTAGCCATACACAATCTGACAATACAGAGTTCTACACTGGATACCGTAGCGAGCACAGACTGAAAAGCAAAGTATTAGTAACATGACTCCTACCCCTACACACAGAGTAGGTGGAGACGGCTGTTCCTAAGTTTATTTCTAAAGGGGAAGAAAAAAAACAAAATGTGCCTGTAAACTGAAAGCGCTCTGCAGAGGACTTAGTAGGAGTAGTTGATGGTTTGCTGCACTCTTATGCGACAGTTGCATGCAGGTCCATACCAAGCAAGCGAGCGAGGAGAGTGCCTTTCCTAGCCTTAATGTGGGAGGGGTCAGTTTTCCTGTATTGCATACACCTTTATTATTCATGAACTAATCAACTTTGTGTTTTAATATCCAGCGTTGATGTTTTTCCAGTACTAAATACTCATGCGCCACCTAGCAACCGGCTCCACGCTGACTTCATTTGAGCAGTAAGTGAATTAACGGCAGATCCTCGGCCGTAGCACCAGTTCCGTTTCCTCCTGTAATCCGCATTCATACCAGTGCTTGCAACAACGTTAACTCTCCCAGCAGACGGAAGATGCCATTTTTCTCATTTCACAGAAAAATGCTAAGAGAAATTTGCACAGCATTAAAAAAAGCATGAAGCGACTTTCATTAAAAAAAAAAAAAAA
Protein		Refseq >NP_001107740\|ubiquitin-like 3 [Xenopus (Silurana) tropicalis] MSSSVPADMINLRLILVSGKTKEFLYSPNDSAADIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPLGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL	Refseq >NP_001085906\|ubiquitin-like 3 [Xenopus laevis] MSSSVPADMINLRLILVSGKTKEFLYSPNDSAADIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPLGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.65171	Xl.21073 [+] Xl.9062
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	UBL3
mouse		MGI	Ubl3	All(2) Targeted, other(2)
zebrafish		ZFIN	ubl3b

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:
Biological:		protein modification process
Cellular Component:
EC:
KOG:

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.51828.5.S2_at [+] Str.51828.5.S1_at Str.51828.5.S3_at	Xl.9062.1.A1_at
Affymetrix 2.0			Xl2.21073.1.S1_at [+] Xl2.53402.1.S1_at Xl2.9062.1.A1_at

Symbol legend[+]