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Summary Expression Gene Literature (4) GO Terms (18) Nucleotides (289) Proteins (33) Interactants (96) Wiki
XB-GENEPAGE-959866
Gene Symbol:
sf3b1

Gene Name:
splicing factor 3b subunit 1

Synonyms:
prp10 , hsh155 , prpf10 , sap155 , sf3b155 ( Add synonyms , Nomenclature history )

Gene Function:
Splicing factor 3b, subunit 1

Protein Function :
Involved in pre-mRNA splicing as a component of the splicing factor SF3B complex. SF3B complex is required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence ...[+]



Interactants:
Loading ...

Diseases: 


Disease Ontology:
myelodysplastic syndrome

OMIM:
MYELODYSPLASTIC SYNDROME; MDS

External Links:
 
Xenbase Gene ID XB-GENE-959867 XB-GENE-17336384 XB-GENE-959871
Gene Symbol sf3b1 sf3b1.L sf3b1.S
Chromosome Chr09 chr9_10L chr9_10S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100127558
108701497
399336
mRNA NCBI Nucleotide NCBI Nucleotide RefSeq
Protein NCBI Protein RefSeq Swiss-Prot
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine sf3b1 sf3b1.L sf3b1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SF3B1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Sf3b1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Sf3b1 Ensembl
zebrafish
ZFIN, AGR sf3b1 ZFIN Ensembl
chicken
GEISHA SF3B1 Ensembl
fruit fly
FLYBASE Sf3b1 Ensembl
worm
Publications
First Phosphorylation-dependent interaction between the splicing factors SAP155 and NIPP1., J Biol Chem 2002  
Most Recent Monoubiquitination by the human Fanconi anemia core complex clamps FANCI:FANCD2 on DNA in filamentous arrays., Elife 2020                
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 16 terms 0 term 4 terms
PANTHER sf3b1
KEGG Pathways K12828
KOG [A] Splicing factor 3b, subunit 1
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks sf3b1
ORFs sf3b1.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience

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