zmynd11 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (0)

Nucleotides (116)

Interactants (0)

XB-GENEPAGE-960938

Gene Symbol: zmynd11 Gene Name: zinc finger, MYND-type containing 11 Add Xenopus synonyms Gene Function: transcriptional regulator Interactants:

XB-GENE-960939

XB-GENE-6487494

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene
mRNA		Refseq >NM_001103001\|Xenopus (Silurana) tropicalis zinc finger, MYND-type containing 11 (zmynd11), mRNA CCCACGCGTCCGCTTGGCGCTTCTGCATCTCATTTCCTCGCTCTTCAGAGACTGTTCTCTAGATAATCCTTTGAGAAACGATATTCACAAAAACAACGCAAGAACATGGCACGGCTCACAAAAAGAAGACAGGCTGATACAAAAGTAATTCAGTACTTATGGACTGCCATTGAAGTAATCCGCAACCAGAAACAGATTGCAAATATTGACCGCATTACAAAGTACATGACGCGAGTGCATGGCATGCATCCAAAAGAGATCACGCGCCAGCTAAGCTTAGCTGTGAAAGATGGCCTTATTGTGGAGACACTTACCGTAGGCTGCAAGGGATCCAAGGCTGGCATTGAGCAGGAAGGATACTGGTTACCTGGGGATGAAATTGACTGGGAGACAGAAACACATGATTGGTATTGTTTTGAATGCCATTCGCCTGGAGAAGTGATGATGTGTGACCAGTGCTTTCGTGTGTATCACCCAAAATGCTTACCTGATGACCTAAGGCTTAGAGATAGCAGTAATCACTGGCAGTGTCCAGTTTGCAAGAGCATGAAGAAGAAAAACAACACCAAGCAAGAGATGGGTAAATACATGCGATTCATTGTTTCCCGCATGAAGGAGAGGGCGATTGAACTCAATAAAAAAGGAAAGGATAGCAAGCATCCGATGTATAGACGTTTAGTTCATACCACCATTGATGTTTCTACTATTAATGAGAAAGTGACTGAAGGAAAATACAAGAGTTACGACGAGTTCAAGGCGGATGCACAGCTACTTCTACACAACACAATTATTTTTTATGGAGACGACAGTGAGCAGGCCGATGTGGCTAAGGTTCTTTACAAGGACACTTGTCATGAGCTGGATGAGCTGCAGCTTTGCAAAAATTGCTTCTATTTGTCAAATGCTCGGCCTGAAAATTGGTTCTGCTATCCCTGTATACCTAATCATGAATTGGTCTGGGCCAAAATGAAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGAAGACAATCAAGTTGATGTTCGTTTCTTTGGCCACCATCATCAGAGAGCCTGGATTCCATCAGATAATATTCAGGAGATTACTGTCAATGTGCATCAGCTACATGTAAAACGCAGTATGGGCTGGAAAAAAGCCTGCGATGAGTTGGATTTGCACCAACGCTTTCTGCGTGAAGGACGGTTCTGGAAATCGAAAGGCGAGGAAAAAGGGGAGGAAGAAGCTGAATCTAGCATATCCTCTACCAGCAATGATCAGCACAAAGCATCTCAGGAACCCAGAGCCAAGAAAGGTCGACGCAATCAAAATGTAGAGCCTAAAAAGGAAGAACAAGAACCTGAACCGGAAACTGAAGCAGTGAGCTCAAGTCAGGAAATCCCTCCAGTTCCTCCTCCAGTTGAAAAGGTTTCCGTTTGCACACAGACCAAGAAGCCAAGTGCCCCCTCTCCCAGAATGCTGCACCGGAGTACACAGACCAACAATGATTTGGCCTGCCAGAACATGTGTCATGACAAGTATAGCAAGATCTTCAATGAGTACAAGGAAAGAGTGGGTGTAGACAACAAGAGAGAGACAGAGAGAGTTGTACGAGAAGCATTAGATAAGCTGCGAGTAGAAATGGAGGAGGAGAAGCGACAAGCCGTTAGCAAAGCTGTATCTAATGCTCAGGCGGAAATGGATAGAAAGTGTAAACAAGTCAAAGAGAAATGCAAAGAAGAGTTTTTGGAAGAGATTAAAAAACTTGCAGCTCAACACAAGCAGCTTATATCCCAAACCAAGAAGAAGCAGTGGTGCTACAACTGTGAAGAGGAAGCCATGTACCACTGCTGCTGGAACACTTCGTACTGCTCCATCAAATGTCAGCAGGAACACTGGCACGCGGAACACAAGCGGACCTGCCGCAGGAAAAGATGAACCTCCTCTCTTTGTCGACATGCAGCAGTTTCCTTTTACTCTTCTCCTCAAGATGCCCTAATTGCTTACTACCTGCATACCATGTTTGCACCAGCTCATTACCTAATTAGTCTGGAAGAGAGGGGGCTGCCCAGTACAGCCCTCCTGCTTTTGGGGTAAAAGACCTTTCCACCTCTGTCATTTTTGCACATTGACACTTGTGCTTCACTTTCCTCTGACTCTGCTTGGGGGTAAGAGAGGTTCCCTACTACGCTAGGCTGGCGACTTCTCTGCTCCCCAAGCTGATGCGCCAACTCGCTGCCAGAGACACCTGCAGTACAGTCTGGAGCCATGTGTTGCAGGTACTTCTGGGAACAAACAGGGTTTAACTTACTATCCTCTCTCATAACTCAAGTTAGCATTACCAGAGCACGCGTTGAATGTTGTATGTTCAGTACAGAATCCTTGCTGACATCCAGTAGTTTTCTTAGAAGACGTTGAATTTTCAGCTCCAAGGCATTTTGTGTTTTGTAGTATTTTAAAACTTTTACAGTAGATTTTAACAAAGTTTTATGTAAACCAAGCTGATTTCATTGTAGTATCGTAGGCGATTTTTTTTTTCTCTCCCCCCTGTGATATGGATAGAACTGATCTCCGACAAAGGCGGCAGGTTTAAAACGAAGTCTGGATCCAAAGACTAAGGCACTTGGTATCTGACCTATCCAGACGGATCTTTTAAACAATGGGGAGTATCCACTAATTTGATCAGAGCGTCAATCATCAATACCGCCGCCTCTCATTACCTTTTCATTTTTAGGAAGGCATTATAGTTTAGTCATACCGAGGGGCTGTAAGGTTAAACTGTAGGGGAACAGGGTTTGCAGAACGAGGGACAACCATTCATATTTTTTTTATTTTTTAAAATGTATCCTGTGTTTCTTCATTACTTATTTTCGATATATAACATTTTATAAAGTAAGACAATATATAAGCTTGTGATCTCATAGTTTTACACTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001096471\|zinc finger, MYND-type containing 11 [Xenopus (Silurana) tropicalis] MARLTKRRQADTKVIQYLWTAIEVIRNQKQIANIDRITKYMTRVHGMHPKEITRQLSLAVKDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETETHDWYCFECHSPGEVMMCDQCFRVYHPKCLPDDLRLRDSSNHWQCPVCKSMKKKNNTKQEMGKYMRFIVSRMKERAIELNKKGKDSKHPMYRRLVHTTIDVSTINEKVTEGKYKSYDEFKADAQLLLHNTIIFYGDDSEQADVAKVLYKDTCHELDELQLCKNCFYLSNARPENWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSDNIQEITVNVHQLHVKRSMGWKKACDELDLHQRFLREGRFWKSKGEEKGEEEAESSISSTSNDQHKASQEPRAKKGRRNQNVEPKKEEQEPEPETEAVSSSQEIPPVPPPVEKVSVCTQTKKPSAPSPRMLHRSTQTNNDLACQNMCHDKYSKIFNEYKERVGVDNKRETERVVREALDKLRVEMEEEKRQAVSKAVSNAQAEMDRKCKQVKEKCKEEFLEEIKKLAAQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRKR

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.19000	Xl.68860
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Phenotype		tropicalis	laevis
Smith Morpholino Screen		image:7661466

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ZMYND11
mouse		MGI	Zmynd11	All(1) Targeted, other(1)
zebrafish		ZFIN	zmynd11	2 Lines(s)

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		ATP-dependent DNA helicase activity ATP-dependent RNA helicase activity ATP-dependent helicase activity More[+] ATPase activity ATPase activity, coupled ATPase activity, coupled to transmembrane movement of ions ATPase activity, coupled to transmembrane movement of substances ATPase activity, uncoupled DNA binding DNA translocase activity DNA-dependent ATPase activity RNA-dependent ATPase activity protein-transmembrane transporting ATPase activity single-stranded DNA-dependent ATP-dependent DNA helicase activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:
EC:		adenosinetriphosphatase
KOG:		[R] PHD Zn-finger protein (alt_id KOG:3612)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.19000.1.S2_at [+] Str.19000.1.S1_at
Affymetrix 2.0

Symbol legend[+]