ctsl2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

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Nucleotides (2475)

Interactants (0)

XB-GENEPAGE-966213

[provisional- machine annotated only] Gene Symbol: ctsl2 [Predicted: Source is Human Entrez Gene] Gene Name: cathepsin L2 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: cysteine protease [KOG] Interactants:

XB-GENE-966214

XB-GENE-966220

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001004869\|Xenopus (Silurana) tropicalis cathepsin L2 (ctsl2), mRNA GCAAAACAGCCTGAGAGGATACATCATGGCACTCTATCTAGGTATTGCTGCTATCTGCTTAACCACAGTGTTTGCTGCTCCAACAACAGATCCAGCTCTGGATAATCATTGGAATCTCTGGAAGAACTGGCATAAAAAGTCCTATGCACCAAAAGAAGAAGGATGGAGGCGAGTGTTATGGGAGAAAAACTTAAGAATGATTGAATTCCACAACCTTGAACACTCTCTAGGAAAACATTCTCATAGCCTGGGAATGAATCAGTTTGGTGACATGACCAATGAAGAATTTAGACAGCTGATGAATGGCTACAAAAACCAAAAGAAGATAAGAGGTTCAACTTTCCTTGCTCCCAATAACTTTGAATCACCCAAGTCTGTGGACTGGCGCAAAAAAGGCTATGTAACACCAGTTAAAGACCAGGGACAATGTGGGTCATGCTGGGCATTCAGTACAACTGGTGCGCTTGAAGGTCAGCACTACAGGAATACTGGTAAAATGATATCTCTGAGTGAGCAAAATCTTGTTGACTGCTCCAGAGCCCAAGGAAACCAGGGATGCAATGGTGGCTTAATGGATCAAGCCTTTCAGTATGTTAAGGATAATGGAGGCATAGATTCTGAAGACTCCTACCCATACACGGCTAAGGATGACCAGGAATGTCACTATGATCCGAACTACAATTCAGCCAATGACACTGGTTTTGTTGACGTTACATCTGGAAGTGAGAAAGATCTCATGAATGCAGTAGCTTCAGTGGGACCAGTCTCTGTTGCAGTTGATGCAGGACATCAGTCATTTCAGTTTTATAAATCTGGGATTTATTATGAGCCTGAATGCAGCAGTGAAGACCTGGATCATGGTGTACTCGTTGTAGGCTATGGATTTGAGGGTGAAGATGAGGATGGCAAGAAATACTGGATTGTAAAGAACAGCTGGAGCGAGAAATGGGGCAACGATGGATACATATACATTGCCAAGGATAGACACAACCACTGTGGAATAGCAACAGCTGCCAGTTATCCTCTGGTTTAAAATAAACCATTGCATATGGACCTTTTTGACCTTGGAACTTTATGTGCACATATTGTGAAACTCCACTTTTATCAAGTACTGGACTGTTTTTACCTGATGGAATTGCTGCTCAAGGCTGTCTTTTAAATTTGTGTTGGAAGTTAACATCCCACATTGAAGCTGGGTTGTTTTAGTATTGTTTACATGTTGATTTTAATGGGTGTTTTATGTGATTTAAGCTTTTATAATGTAAAATAAAAACTTGTTAATTCAACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001094020\|Xenopus laevis cathepsin L2 (ctsl2), mRNA CAAAGAAACAGCCTGAGAGGTTAAACATGGCACTCTATCTAGTTGCTGCTGCTCTCTGCTTAACAACCGTATTTGCTGCTCCAACAACCGACCCTGCTCTAGATGATCATTGGCATCTCTGGAAGAACTGGCATAAAAAGTCCTATCTACCCAAAGAAGAAGGCTGGAGGAGAGTGTTATGGGAGAAGAACTTGAGAACAATCGAATTTCACAACCTTGATCACTCTCTTGGAAAACATTCTTACAGACTGGGAATGAATCAATTTGGTGACATGACAAATGAGGAGTTTCGACAGCTGATGAATGGCTACAAAAACCAAAAGATGATAAAAGGCTCAACTTTCCTTGCCCCCAATAACTTTGAAGCACCAAAGACAGTGGACTGGCGTGAAAAAGGCTATGTAACACCAGTTAAAGACCAGGGGCAATGTGGTTCATGCTGGGCATTCAGTACAACAGGTGCACTTGAAGGTCAGCACTACAGGAAGGCTGGTAAATTGATTTCTCTAAGTGAGCAAAATCTTGTTGACTGCTCCAGAGCTCAAGGAAACCAGGGATGCAATGGTGGCCTTATGGATCAAGCTTTCCAGTATGTCAAGGATAATGGAGGCATCGATTCTGAAGACTCGTACCCATACACTGCTAAGGATGACCAGGAATGTCACTATGATCCAAACTACAATTCAGCAAACGACACTGGTTTTGTTGACGTTCCATCTGGAAGCGAAAAAGATCTCATGAAGGCAGTAGCTTCAGTGGGACCAGTTTCTGTTGCAGTTGATGCAGGACATAAATCCTTCCAGTTTTATCAGTCTGGAATTTATTATGATCCTGAATGCAGCAGTGAAGACCTGGATCATGGTGTACTTGTTGTGGGTTACGGCTTTGAAGGTGAAGATGTGGATGGGAAGAGATACTGGATCGTCAAGAACAGCTGGAGTGAGAAATGGGGCAACAATGGATACATTAAGATTGCCAAGGATAGACACAACCACTGTGGAATTGCAACAGCTGCCAGTTATCCTCTGGTTTAATATAAGCCATTATATATGGACCTCATTACACCTTGAACTTTATGTGCACATTGTGTGAACCTCCAATTTTAGCAAGTACTGGCCTGTTTTTACCTGATGGAATTGCTGCTCAAGGCTGTCTTTTACATTTGTGTTGGAAGTTTAACATCCCACATTGAAGCTGGGTTGTTTTAGTTTTGTTTACATGTTGATTTTAATGGTGTTTTATGTGATTTAAGCTTTTATAATGTAAAATAAAAAACTTGTTAATTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001004869\|cathepsin L2 precursor [Xenopus (Silurana) tropicalis] MALYLGIAAICLTTVFAAPTTDPALDNHWNLWKNWHKKSYAPKEEGWRRVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMTNEEFRQLMNGYKNQKKIRGSTFLAPNNFESPKSVDWRKKGYVTPVKDQGQCGSCWAFSTTGALEGQHYRNTGKMISLSEQNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNYNSANDTGFVDVTSGSEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGIYYEPECSSEDLDHGVLVVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDRHNHCGIATAASYPLV	Refseq >NP_001087489\|cathepsin L2 precursor [Xenopus laevis] MALYLVAAALCLTTVFAAPTTDPALDDHWHLWKNWHKKSYLPKEEGWRRVLWEKNLRTIEFHNLDHSLGKHSYRLGMNQFGDMTNEEFRQLMNGYKNQKMIKGSTFLAPNNFEAPKTVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHYRKAGKLISLSEQNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNYNSANDTGFVDVPSGSEKDLMKAVASVGPVSVAVDAGHKSFQFYQSGIYYDPECSSEDLDHGVLVVGYGFEGEDVDGKRYWIVKNSWSEKWGNNGYIKIAKDRHNHCGIATAASYPLV

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.51844 [+] Str.25273 Str.36542 Str.43670 Str.44328 Str.45242 Str.46663 Str.47783 Str.65753 Str.71179	Xl.20985 [+] Xl.82116 Xl.20206
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		3 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	CTSL2
mouse
zebrafish

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		cathepsin F activity cysteine-type endopeptidase activity cysteine-type peptidase activity
Biological:		proteolysis
Cellular Component:
EC:		Cysteine endopeptidases
KOG:		[O] Cysteine proteinase Cathepsin F

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.5963.1.S1_at [+] Str.36542.1.A1_at Str.36542.1.A1_x_at Str.25492.1.A1_at Str.25476.1.A1_at Str.25273.1.A1_at Str.43670.1.A1_at Str.44013.1.A1_at Str.45242.1.A1_at Str.46663.1.A1_at Str.46663.1.A1_x_at Str.47783.1.A1_at	Xl.20206.1.S1_at [+] Xl.2565.5.A1_s_at
Affymetrix 2.0			Xl2.20985.1.S1_a_at [+] Xl2.20206.1.S1_at Xl2.20206.1.S1_a_at Xl2.20985.2.S1_at Xl2.20985.2.S1_a_at

Symbol legend[+]