rplp0 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Nucleotides (3921)

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XB-GENEPAGE-976210

[provisional- machine annotated only] Gene Symbol: rplp0 [Predicted: Source is Human Entrez Gene] Gene Name: ribosomal protein, large, P0 [Predicted: Source is Human Entrez Gene] Synonyms: lp0, l10e, rpp0, prlp0 Add Xenopus synonyms Gene Function: 60S acidic ribosomal protein P0 Interactants:

XB-GENE-976211

XB-GENE-976216

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_203736\|Xenopus (Silurana) tropicalis ribosomal protein, large, P0 (rplp0), mRNA GTGTGAGGGAATATCTAGTCTTTAAACCCTTTTGTGGCAATCCTTGGAAGCACTGACAAGATGCCCAGGGAAGACAGGGCTACCTGGAAGTCCAACTATTTCCTGAAAATCATTCAATTGCTGGATGATTATCCAAAATGCTTCATTGTGGGGGCGGACAATGTTGGTTCAAAACAAATGCAGCAGATCCGTATGTCCCTGCGTGGAAAAGCTGTGGTGCTCATGGGAAAGAACACAATGATGCGCAAGGCTATTCGTGGTCATCTGGAAAACAACCCAGCTCTGGAGAAACTTCTATCTCACATCAAGGGTAATGTGGGCTTTGTTTTCACAAAGGAAGATCTTACTGAGGTCAGAGACATGTTGCTGGCAAATAAGGTTCCTGCCTGTGCCCGTGCAGGAGCAATAGCACCTTGCGGGGTCGTTGTGCCCGCTCAGAATACTGGATTGGGCCCTGAAAAGACCTCCTTCTTCCAGGCTTTGGGGATCACCACAAAAATCTCCAGAGGAACCATTGAAATCTTGAGTGATGTGCAGCTGATCAAGACTGGAGATAAAGTGGGTGCCAGTGAAGCCACACTCTTAAACATGTTGAATATTTCCCCATTTTCTTATGGATTAATCATTCAACAAGTGTATGACAATGGCAGCATCTATAGTCCAGAGGTGCTGGATATCACTGAGGAGGCCTTGCATGTTCGCTTCCTTGAGGGTGTTCGTAATGTTGCCAGTGTCTGTCTTCAGATTGGTTATCCCACCGTGGCCTCTGTGCCTCACTCAGTCATCAATGGATACAAGCGTGTCCTTGCCATTGCAGTTGAAACAGACTACAGCTTCCCCCTGGCCGACAAGGTCAAGGCATTCCTGGCAGATCCATCAGCCTTTGTTGTTGCTGCTCCCGCTGCTGACGTGGCTGCTGCTCCTGCTGCTGCTCCTGCTAAGGAGGAAAAGCAAGAAGAGTCTGAGGAATCTGATGATGATATGGGATTTGGTCTCTTTGACTAAACCTTGATTGTTCCAAGTTCATAATTTAAAGACTTTTACAGTCTCTACTTTTGCTTTCAGTTCTTCACACCTACTGTTAACTGAGAAATAAAAGCAAAATTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001086665\|Xenopus laevis ribosomal protein, large, P0 (rplp0), mRNA GTTCGGAGCCCTGGTGTGAGGGAATATCTGGTCTTTAAACCCTTTTGTGGCAATCCTTGGAAGCACTGACAAGATGCCCAGGGAAGACAGGGCTACCTGGAAGTCCAACTATTTCCTAAAGATCATTCAATTGCTCGATGATTATCCAAAATGCTTCATTGTGGGGGCGGACAATGTTGGTTCAAAACAAATGCAGCAGATCCGTATGTCCCTGCGTGGAAAAGCTGTGGTGCTCATGGGAAAGAACACAATGATGCGCAAGGCTATCCGTGGTCATCTGGAGAACAACCCAGCTCTTGAGAAACTTCTTTCTCACATCAAAGGTAATGTGGGCTTTGTTTTCACAAAGGAAGATCTCACCGAGGTCAGAGACATGCTGTTGGCAAATAAGGTGCCTGCCTCTGCCCGTGCAGGAGCGATAGCACCTTGTGAAGTCACTGTGCCCGCTCAGAATACTGGACTGGGCCCTGAAAAGACCTCCTTCTTCCAGGCTTTGGGAATCACCACTAAAATCTCCAGAGGAACCATTGAAATCTTGAGTGACGTGCAGCTAATCAAGACCGGAGATAAAGTGGGTGCCAGCGAAGCCACACTCCTGAACATGTTGAATATTTCTCCATTTTCTTATGGATTAATCATTCAGCAAGTGTATGACAATGGTAGCATCTATAGTCCTGAGGTGCTAGATATCACTGAAGAGGCTTTGCATGTTCGCTTCCTTGAGGGTGTTCGCAATGTTGCCAGTGTCTGCCTTCAGATTGGTTATCCCACCGTAGCCTCAGTGCCTCACTCCGTCATCAATGGGTACAAGCGTGTCCTTGCCATTGCAGTGGAAACTGACTACAGCTTCCCTCTGGCCGACAAGGTCAAGGCATTCCTGGCAGATCCATCAGCCTTTGTTGTTGCTGCTCCTGCTGCTGTGGCGGCGGCTGCTGCTCCTGCTGCTGAAGCCGCAAAGGATGAAAAGCAAGAAGAGTCTGAGGAATCTGATGATGATATGGGATTTGGTCTCTTTGACTAAACTTTGATTGTTCCAACATAATAAAATAAAGACTCTTACAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_989067\|ribosomal protein, large, P0 [Xenopus (Silurana) tropicalis] MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLSHIKGNVGFVFTKEDLTEVRDMLLANKVPACARAGAIAPCGVVVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRNVASVCLQIGYPTVASVPHSVINGYKRVLAIAVETDYSFPLADKVKAFLADPSAFVVAAPAADVAAAPAAAPAKEEKQEESEESDDDMGFGLFD	Refseq >NP_001080134\|ribosomal protein, large, P0 [Xenopus laevis] MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLSHIKGNVGFVFTKEDLTEVRDMLLANKVPASARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRNVASVCLQIGYPTVASVPHSVINGYKRVLAIAVETDYSFPLADKVKAFLADPSAFVVAAPAAVAAAAAPAAEAAKDEKQEESEESDDDMGFGLFD

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		[+] Str.43735 Str.5757 Str.44270 Str.68153	Xl.1728
Unigene EST Profile			EST Profile
GEO data			GEO
Images		2 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	RPLP0
mouse		MGI	Rplp0	All(1) Targeted, knock Out(1)
zebrafish		ZFIN	rplp0	1 Lines(s)

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		DNA-(apurinic or apyrimidinic site) lyase activity structural constituent of ribosome
Biological:		ribosome biogenesis and assembly translational elongation
Cellular Component:		intracellular ribosome
EC:		DNA-(apurinic or apyrimidinic site) lyase
KOG:		[J] 60S acidic ribosomal protein P0

Reagents		tropicalis	laevis
Clones			open biosystems
			geneservice/RZPD imagenes
Affymetrix 1.0		Str.41441.1.A1_x_at [+] Str.5646.1.S1_at Str.11413.1.A1_at Str.43367.1.A1_at Str.43442.1.A1_at Str.43735.1.A1_x_at Str.43735.1.A1_at Str.44270.1.A1_at Str.6054.1.S2_at Str.46509.1.A1_at Str.5646.1.S2_at Str.5757.1.A1_at	Xl.1728.1.S1_at
Affymetrix 2.0			Xl2.1728.1.S1_at [+] Xl2.761.1.S1_s_at

Symbol legend[+]