gdi2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (0)

Nucleotides (597)

Interactants (0)

XB-GENEPAGE-980620

Gene Symbol: gdi2 [Predicted: Source is Human Entrez Gene] Gene Name: GDP dissociation inhibitor 2 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: RAB proteins geranylgeranyltransferase component A (RAB escort protein) Interactants:

XB-GENE-980621

XB-GENE-980627

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001005676\|Xenopus (Silurana) tropicalis GDP dissociation inhibitor 1 (gdi1), mRNA GTGAGCGCATCCCTGATTCTTGCTCGACTCTCTCGGTGCCCGGAACATCATGAATGAGGAGTACGACGTGATCGTGTTAGGCACCGGCCTGACGGAATGCATTCTCTCAGGAATAATGTCAGTGAATGGCAAAAAGGTCTTACACATGGATCGTAACTCTTACTATGGAGGAGAGAGCGCTTCAATAACACCTTTGGAAGATCTATACAAAAGATTTAATATACCTGGAAGTCCTCCGGAGTGTATGGGGCGAGGAAGAGACTGGAATGTGGACCTCATTCCCAAATTCCTAATGGCCAATGGCCAGTTAGTGAAGATGTTGCTTTTCACAGAAGTCACCCGTTATCTGGACTTTAAAGTTATTGAGGGAAGCTTTGTCTATAAAGGAGGAAAAATCTATAAAGTCCCTTCAACAGAAGCAGAAGCCCTTACATCTAGTCTAATGGGCATGTTTGAAAAGCGGCGGTTTAAGAAATTTCTAAGTTATGTTGCCAACTTTGATGAGAATGATTCCAAGACACTAGAATGTGTTGACCCAAAGAAAACAACAATGCGAGATGTCTACAAGAAGTTTGATTTGGGCCAGGATGTAATTGACTTTACAGGTCACGCTCTAGCACTCTATAGGACTGATGAATATCTGGACCAGCCCTGTCTTGAGACAATAAACCGGATTAAATTGTATAGTGAATCTCTTGCTCGATATGGCAAAAGCCCTTACCTTTATCCACTTTATGGCCTTGGAGAGCTGCCACAAGGTTTTGCAAGACTGAGTGCCATTTATGGTGGGACATATATGTTGAACAAACCAATAGAAGAGCTGGTGATGGAGAATGGCAAAATTGTTGGTGTGAAATCAGAAGGGGAGGTGGCACGATGCAAGCAGCTGATATGTGATCCAAGTTACGTTTCAGATCGGGTCACTAAAGTAGGACAGGTCATCCGTGTAATTTGTATTCTGAGCCATCCAATAAAGAACACGAACGATGCCAATTCTTGTCAGATTATCATTCCACAGAATCAAGTCAACAGAAAATCTGACATCTATGTGTGCATGATCTCATATGCTCACAATGTGGCTGCACAAGGAAAATATATTGCAATAGTCAGCACTACTGTTGAAACGAATGACCCAGAGAGAGAGATCAAGCCTGTTCTGGAACTCCTGGAGCCCATCGAGCAAAAGTTTGTTAGCATTAGTGACATGTATGCACCAACCGATGTGGGAACTGATAGCCAGATTTTTATTTCCCGCACTTATGATCCTACCACCCACTTTGAAACCACCTGCAATGACATTAAGGACATCTACAAAAGGATGATGGGCTCAGAATTTGACTTTGAAGAGATGAAACGCAAGAAGAGCGACATTTTTGGGGAAGATCAATAAACTCTCAGTATAGGAGAAGTTTCGAATCTGCTTCAAATATGTATTTCAGGAACTTAGGAACACTGTATGAATCTCAATATTGTATGGCCTGCTTTGTTGTAAAGACCTCATGACATCAAAGAGTATTGCACTGGTAATTGCTCCCTTTTGTTTCATGATGGCTTTCTCCCCCTTTTTCTCTCAAAGAGGCTGCTGTTCAAAATAAGTCCTATTTGTGCGGTTCTTTATTTCTGTTACCTCCAATAGGTTTTTTGAAGGCATCTAAATGTTCTAGTTGAATCCAAAGTGTAAACGATGTATTGATGTGCATATAATATTGGCATTTTAAGCTTGATATTTTAATTTAGAATTCACCATGGTATTTTGCTGTGGAAGCAGCTAGAGGGTTTGTGGCACCAAAATGCAGAATTCTATGCCCTCATACCCTTTTGCACATTCATTGTACAAATCTTTTATTAATGAAGCGCCTCTCCGTTACTGCTTTCCCCTCGTATAGTCTGTACCCAGATCTCTCTGCACTATGTAACTCCTGGAGTGCCATTCTCATGTTTTAAACTATTGCCACCAGCTGGGAAAAAAAAGATGGGCTGTAGACCACCTTTCTGTTTTAATCTAATAAAGTAACAAACACAAAGTATTATGCGGGTAAGACTTGGATGCATTTTTCTTAACACTCTCACAACTTTTTGGACCAAACAGAGGTGCGGAATTGATTTGACAGTCTGGTGTGTCTCTCCATAGAGTTTAAAAATGATTTCTGTACTGCAAAGTAAAGCCAAATTCTGGAAACTGGTGCTGTGCTTTATTTAATCATTCATTTTGTTTGGTGATGTTGATTATGTTGTTTCTCTACTATATAACCATCCTGCACAAGGACTCCCTTAAAAGTATTTGCATAGTTTGCCCACTGTCTGGTACAGAAGCTGTTAAAGCCTTCAGAATGAAACACTGATTGCTGGGACATCAGGGTAACTGAGTCTATCTGGCACAAGTCGGCAGTGGGGGGCAGTGGAGAGGCAGGAGTGGCAAAAAGTTCAGCTGGGTGGTAGCAAAGTATTTGTTAGAGGAATAGTGAGATTTTTCTGATTAAAAGTGATACTTTCCATTTTAAGGGAAAATATACCATTTTTTGACATAAGTTCATTCAGTTAGATGCATAACATTATCTGAACTTCCAACAATAAATGTAGAACGGACATACCCAGTTCCACAGATTGGAAGCCATGTAACTCATACAAACCACACAAAAAAAAAAAAAAA	Refseq >NM_001086767\|Xenopus laevis GDP dissociation inhibitor 1 (gdi1), mRNA CTGATTCTTCCTCGCGTTTCTTCTGATTCACTCGGTGCCGGCAACATCATGAATGAGGAGTACGACGTAATCGTGTTAGGCACCGGCCTGACGGAATGCATCCTCTCTGGAGTAATGTCTGTGAATGGCAAAAAGGTCTTACACATGGATAGAAACTCTTACTATGGAGGAGAGAGTGCATCAATAACACCTTTGGAAGATCTGTACAAAAGGTTTAATATACCTGGAAGCCCTCCGGAGTCTATGGGACGAGGAAGAGACTGGAATGTGGACCTCATTCCCAAATTTCTTATGGCCAATGGCCAGTTAGTGAAGATGTTGCTTTTCACAGAAGTTACCCGTTATCTGGACTTTAAAGTTATTGAGGGGAGCTTTGTCTACAAAGGAGGCAAAATCTATAAGGTCCCTTCAACTGAAACAGAAGCCCTTGCATCTAGTTTAATGGGGATGTTTGAAAAGCGACGATTTAAGAAATTTCTGAGCTACGTTGCCAGCTTTGATGAGAATGACAGCAAGACACAAGAAGGTGTTGACCCAAAGAAAACTACAATGCGAGATGTCTACAAGAAGTTTGATTTGGGCCAGGATGTTGTTGACTTTACAGGTCATGCTCTGGCACTCTATAGGACTGATGAATATTTGGACCAGCCCTGTCTTGAGACGGTAAACCGGATTAAATTGTACAGTGAATCTCTTGCTCGATACGGCAAAAGCCCATACCTTTATCCACTCTATGGCCTTGGAGAACTGCCACAAGGTTTTGCAAGACTGAGTGCCATTTATGGTGGGACATATATGTTGAACAAACCAATAGAAGAGCTGGTGATGGAGAATGGCAAAATTGTTGGTGTGAAGTCTGAAGGGGAGGTGGCCCGATGCAAGCAGCTGATATGTGATCCTAGTTACGTTCCAGATCGGGTGACTAAAGTAGGACAGGTTATCCGTGTAATTTGTATTCTGAGCCATCCAATAAAGAACACAAATGATGCCAATTCCTGCCAGATCATCATTCCACAGAATCAAGTCAACAGAAAATCTGACATCTATGTGTGCATGATTTCATATGCCCACAATGTGGCTGCACAAGGAAAATATATTGCAATAATCAGCACTACTGTTGAAACAAACGACCCGGAGAGAGAGATCAAGCCCGCTCTGGATCTCCTGGAACCCATTGAGCAGAAGTTTGTTAGCATTAGTGACATGTTTGCACCTACTGATATGGGAACCGAAAGCCAGATATTTATTTCTCGCACTTATGATCCTACCACCCACTTTGAAACCACCTGCAATGACATTAAGGATATCTACAAAAGGATGATGGGCTCAGAATTTGACTTTGAAGAGATGAAACGCAAGAAGAGCGACATTTTTGGCGAAGACCAATAAGCTCCCAGTATAGGAGAAGTTTTGAATCTGCTTCAAATATGTATTTCAGGAACTTAGGAACACTGTATGAATCTCAATATTGTATGGCCTGCTTTGTTGTAAAGACCTCATGACATCAAAGAGTATTGCACTGGTAATTGCTCCCTTCTGTTTCATGATGGCTTTCCCCCCCCCCCTTCCCTTTTTTCTATCAAAGAGGCTGCTGTTAAAAATAAGTCCTATTTGTGCGGTTCTTTTTTCTGTTACCTCCAATAGGTTTTTTGAAGGCATCTAAATGTTCTGGTTGAATCCAAAGTGTAAACGATGTATCGATGTGCATATAATATTGCCATTTTAAGCTTGGTATTTTAATTTAGAATTCACCATGGTATTTTGCTTTGGAAGAAGCTAGAGGGGTTGTGGCCTGCAAGGAGTCTCCCTTGCCCCAGGAACAATTCTGTGCCCACCCTTTTGCCCATTAATTGTACAAATCTTTTATCAATGAAGCGCCTCTCCGTTACTGCTTTCTCCTCCCCTCGTATAGTCTGTACCCAATTCTCTCTGCCCTGTGTAACTCCTGGAGTGCCATTCTCATGTTTTAAACTATTGCCACCGGCTAGGGAAAAAAAAAAAAGTTGGGCTGTAGACCACCTTTCTGTTTTAATCTAATAAAGTAACAAACACAAAGTATTACGCAGGTAAGGCTTGGACGCATTTTTCTAAACACTGTTGCAACTCTTTGAAAGGACCAAACTGAGAATTGTCTGGTGTGTTGCTCCATAGAATTTGAAATGATTTCTGTACTGCAAAGTAAAGCCAAATTCTGGAAAAAAAAAAAAAAA
Protein		Refseq >NP_001005676\|GDP dissociation inhibitor 1 [Xenopus (Silurana) tropicalis] MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNSYYGGESASITPLEDLYKRFNIPGSPPECMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVIEGSFVYKGGKIYKVPSTEAEALTSSLMGMFEKRRFKKFLSYVANFDENDSKTLECVDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDEYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEELVMENGKIVGVKSEGEVARCKQLICDPSYVSDRVTKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIVSTTVETNDPEREIKPVLELLEPIEQKFVSISDMYAPTDVGTDSQIFISRTYDPTTHFETTCNDIKDIYKRMMGSEFDFEEMKRKKSDIFGEDQ	Refseq >NP_001080236\|GDP dissociation inhibitor 1 [Xenopus laevis] MNEEYDVIVLGTGLTECILSGVMSVNGKKVLHMDRNSYYGGESASITPLEDLYKRFNIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVIEGSFVYKGGKIYKVPSTETEALASSLMGMFEKRRFKKFLSYVASFDENDSKTQEGVDPKKTTMRDVYKKFDLGQDVVDFTGHALALYRTDEYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEELVMENGKIVGVKSEGEVARCKQLICDPSYVPDRVTKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIISTTVETNDPEREIKPALDLLEPIEQKFVSISDMFAPTDMGTESQIFISRTYDPTTHFETTCNDIKDIYKRMMGSEFDFEEMKRKKSDIFGEDQ

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.24331	Xl.5983
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		2 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	GDI2
mouse		MGI	Gdi2	All(2)
zebrafish		ZFIN	gdi2

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		Rab GDP-dissociation inhibitor activity
Biological:		protein transport regulation of GTPase activity
Cellular Component:
EC:
KOG:		[O] RAB proteins geranylgeranyltransferase component A (RAB escort protein)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.24331.1.S2_at [+] Str.24331.1.S1_at	Xl.5983.1.S1_at [+] Xl.5983.1.S1_x_at Xl.5983.2.A1_a_at Xl.5983.2.A1_at
Affymetrix 2.0			Xl2.5983.1.S1_x_at [+] Xl2.21958.1.A1_s_at Xl2.5983.2.S1_a_at

Symbol legend[+]