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Summary Expression Gene Literature (2) GO Terms (0) Nucleotides (5137) Proteins (20) Interactants (249) Wiki
XB-GENEPAGE- 984491

Gene Symbol: ccdc50

Gene Name: coiled-coil domain containing 50

Synonyms: ymer
Add Xenopus synonyms , Nomenclature history


Gene Function: C-type lectin

Protein Function:


Interactants: Loading ...

OMIM Disease Associations: DEAFNESS, AUTOSOMAL DOMINANT 44; DFNA44
1/3
 
Xenbase Gene ID XB-GENE-984492 XB-GENE-984496 XB-GENE-17332013
Gene Symbol ccdc50 ccdc50.L ccdc50.S
Chromosome Chr05 chr5L Scaffold86
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq NCBI Nucleotide
Protein Refseq TrEMBL Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.51921 Str.26280 Xl.47001 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 6 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine ccdc50 ccdc50.L ccdc50.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards CCDC50 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Ccdc50 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN
chicken
GEISHA CCDC50 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Gene expression screening in Xenopus identifies molecular pathways, predicts gene function and provides a global view of embryonic patterning. [Mech Dev 1998]
Most recent: Early regeneration genes: Building a molecular profile for shared expression in cornea-lens transdifferentiation and hindlimb regeneration in Xenopus laevis. [Dev Dyn 2004]
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 0 term
EC
PANTHER ccdc50
KEGG Pathways
KOG [TV] C-type lectin
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
ORF ccdc50 ORF1
Affymetrix 1.0 Str.51921.1.S1_at Xl.4516.1.A1_at [+]
Affymetrix 2.0 Xl2.14896.1.S1_at [+] Xl2.14896.1.S1_at

Symbol legend[+]

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