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Summary Expression Gene Literature (6) GO Terms (6) Nucleotides (508) Proteins (56) Interactants (123) Wiki
XB-GENEPAGE-988024
Gene Symbol:
upk1b

Gene Name:
uroplakin 1B

Synonyms:
upib , upk1 , tspan20 ( Add synonyms , Nomenclature history )

Gene Function:
Tetraspanin family integral membrane protein

Protein Function :
Mediates the post-translational oxidative deamination of lysine residues on target proteins leading to the formation of deaminated lysine (allysine).



Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-988025 XB-GENE-17337290 XB-GENE-988030
Gene Symbol upk1b upk1b.L upk1b.S
Chromosome Chr02 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 733741
398638
444780
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq NCBI Protein RefSeq
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine upk1b upk1b.L upk1b.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards UPK1B OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Upk1b MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Upk1b Ensembl
zebrafish
chicken
GEISHA UPK1B Ensembl
fruit fly
worm
Publications
First Origin of the tetraspanin uroplakins and their co-evolution with associated proteins: implications for uroplakin structure and function., Mol Phylogenet Evol 2006  
Most Recent Uroplakins play conserved roles in egg fertilization and acquired additional urothelial functions during mammalian divergence., Mol Biol Cell 2018                    
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 1 terms 1 terms
PANTHER upk1b
KEGG Pathways K17347 K17347 K17347
KOG [R] Tetraspanin family integral membrane protein
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks upk1b
ORFs upk1b.L ORF1 upk1b.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience

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