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Summary Expression Gene Literature (0) GO Terms (1) Nucleotides (98) Proteins (26) Interactants (50) Wiki
XB-GENEPAGE-990836
Gene Symbol:
smg9

Gene Name:
SMG9 nonsense mediated mRNA decay factor

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
Uncharacterized conserved protein

Protein Function :
Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited by release factors to stalled ribosomes together with smg1 and smg8 (forming the SMG1C protein kinase c...[+]


InterPro :
Cation/H exchanger , Na+/solute symporter sf , SMG9 , P-loop NTPase

Interactants:
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Diseases: 


OMIM:
HEART AND BRAIN MALFORMATION SYNDROME; HBMS

External Links:
 
Xenbase Gene ID XB-GENE-990837 XB-GENE-17336133 XB-GENE-990840
Gene Symbol smg9 smg9.L smg9.S
Chromosome Chr7 Scaffold71
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.2
CDS Gene model Gene model
Entrez Gene 100216177
779402
mRNA NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine smg9 smg9.L smg9.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SMG9 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Smg9 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Smg9 Ensembl
zebrafish
ZFIN, AGR smg9 ZFIN Ensembl
chicken
GEISHA SMG9 Ensembl
fruit fly
worm
Publications
First
Most Recent
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Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 1 terms 0 term 1 terms
PANTHER smg9
KEGG Pathways K18735 K18735
KOG [S] Uncharacterized conserved protein (alt_id KOG:4181)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks smg9
ORFs smg9.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

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