Gene Symbol: slc31a1 Gene Name: solute carrier family 31 (copper transporters), member 1 Synonyms: ctr1, Xctr1 Add Xenopus synonyms Gene Function: Copper transporter Interactants: dvl2(1) , frs2(1) , hck(1) , mapk1(1) , myc(1) , nrp1(1) , t(1) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 4.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001001238|Xenopus (Silurana) tropicalis solute carrier family 31 (copper transporters), member 1 (slc31a1), mRNA GAAGCGGTCTGAGGTGACAGTACGCGGAGTGACCTCTGGTTCCGGGATTGGAACTACGGATCCTGCGGAGGGTGAGTCTGACTGTCGCTTCGGCCCAACATGGATCACTCCCACCACACGGTAACTACCAGCGACCCCCACGGGGGCCACCACCACCCAACCACATCCGGGAACCACGGCGACCACGGGGGCAGCATGCACATGATGCAAATGACCTTTTACTTTGGATACGAGAATGTGGAGGTGCTGTTCACCGGGTTGGTCATTAACTCTGCAGGAGAAATGGCGGGTGCGTTCGTGGCGGTGTTCCTGCTGGCGCTGCTGTACGAGGGGCTGAAGATCTCGCGGGAGGCCTTACTCAGGAAGTCACAAGTCAGTATTCGCTATAACTCCATGCCGGTGCCGGGGCCCAATGGGACCATACTGATGGAGACCCACAAAACAGTAGGGCAGCGGATGCTGAGTGTGCCCCACCTGCTGCAGACCCTACTGCACATAATCCAGGTAGTGGTGAGCTACTTCCTGATGCTGATCTTCATGACGTACAACGCCTACCTGTGCATCGCGGTGGCCGCCGGGGCCGGGACGGGCTACTTCCTGTTCAGCTGGAAGAAGGCGGTGGTGGTGGACATCACGGAACATTGCCATTAACGAGCGCTCGTTAGGGAAGGAGCTCTGTGCCCCGCCTCCATCGGCATTCCTAGATGTTGGTACCGGGGGTATTGGGGTAACCCTACATACAGAGTGCCTTTATTTGCCTCTAGCGGGGGTCAGTGACACTTTCCTTTGAGGATAAAGTGGATGAACCACATGACCATGTAGCCTCACCCCCTTCCCTCCTCTTCCTCTGCGCCAATCATACGGTGGCTCCTGGAAGACACGCCCTACAGTGTCACTGCAGCCAATCAAGTCTTTGTCTCATCTGAAGCCTGGCCTAAGCACCACCACTCTCATTGGCCGGTCTGTACGTCATGTGACCTTCCAGCCAGCCCTACGACTTCACATGTTCGATTCCCGTTATCCCCACATCCGATTTCTACGGAACTTTCCATGGAAGTATAACGAGTCCGTGTGGCAGTAAAGCCGATGTTCAACTGTAACATTGTGTGTCTGTTTCATACACTCGCCAGGTTAACTTGCCCTTTAATCGTCCCTATGATAGTCTGGAGCTTTAAGCCCCGCCCCCTCGGTACCCCAAACGGCAGAAGTTCTAATCCCATCCCTTAGCGACCAATTATAACCCAATATTTAGATGTGCCGCCAAGGGGCGGAGTCAAGGCGATCACATGTTCATGTTAATTGCAGAATTATTCGCAATGTTACCGATTTCATTTTTTTTTATTTAAGATTTTTTTTTTTATGGTTTTATCTGCATCATGTGACCTTTTTATAAATTGCCTTTATTTCCAATAGTGAAAAATAATAATAATTATTGAACCTTTTAATAAACGAGAATCTGCAGTCGGAAAAAAAAAAAAAAAAAA	Refseq >NM_001086264|Xenopus laevis solute carrier family 31 (copper transporters), member 1 (slc31a1), mRNA GACTGAAATACCCTCCGTGCCTCCGTGTGTGTCTGCTGGAAACTAAGGGCACCCCGTGTGTGCTAGGCTTCTATCAGCTGATCTCTGGACATGAATCACTCTCACCATATGGCAACTACCAGCGACCCACACGCCGGCCACCAGCACCCCACCACGTCTGGAAGTCACGGCGACCATGGGGGAGGGTCTGGGATGCACATGATGGCAATGACCTTTTACTTTGGATATGAGAATGTGGAGGTGCTATTCACAGGCCTGGTCATTAATTCTGCAGGAGAAATGGCGGGCGCCTTTGTGGCCGTGTTCCTGTTGGGTTTGCTGTACGAGGGGCTGAAGATTTCGCGGGAAGCCTTGCTGAGGAAGTCACAAGTCAGCATCCGATATAACTCCATGCCGGTGCCGGGGCCCAATGGGACCACACTGATGGAGACTCACAAAACAGTGGGGCAGCGTATGTTCAGTTTACCCCACATGATGCAGACCCTGCTGCACATCATCCAAGTGGTGGTGAGTTATTTCCTTATGTTGATCTTCATGACGTACAACGCTTACCTGTGCATCGCTGTGGCTGCCGGAGCCGGGACCGGTTACTTCTTGTTCAGCTGGAAGAAGGCGGTGGTGGTGGACATAACGGAACATTGTCATTAATGAGCAGTCGCTGGGGAAGGAGACCTCTCTGCTGCCTCCATCAGTGACCTTCATTCCTAGACATGGCTAGATCTGGTACTATGAGAGTGAATAGGGTAACCGTATGTATATAGTGCCTTTATATGCCGGCAGACCCGTGCCTCTTGGAAACTACCCTTGTTGATGAACCATACGACCACGTAACCTCGACCTTCCCACGTGGAAAATACAACTTATAGAGTTGCTGCAGCCAATCAAGTCTTTGTCTCACGTCAAGTGCATAACCGATTCCAGCACCACTGCTCTCATTGGCCAATCTCTACACGTCTGTGACTTCTCTGCGTGTAGACTATTAATTGCTTGTGATCCGGCTGAACGGCTTCTTTGGAACTTCCATGTTCAATTCCCTTCATCTCCAAATCCGATTTCCTGCAAAGTTCTCTGGAAATTGCCCTGGACTTTGTTTCTATTATTATTAGAATATTCATTAGGAGGTATAATGAGTCTATGTTTAGTCGTGCAGTAAAGCGATTTACAACTAAAACACTCTGTTTTATATACTCGGGATTAACTTACCCTTCATATACACACACACGATTCCAACACTTATAGTTTTCCCCTCCCTTTATGCTGAATGGTCTCCAGGCAGAAGTGTTGATCCCTCCCCGAGTTTTAAGCGACCAATTGAAATCTAATAGAGATTTGTATAATTACAATGTGACGTGGATAGGCGAAGTCACAATGATCACATGTTTGTCAATCGAATAACTATTCCCAGTATTTTTTTTTTTATTTAAGATCTTGCTTTGATGGATTTAGCTGAATAATGTAATGTTTTTATAAATTGTCTTTCTTTCCAATAGTGAATAATTGTAACCAAAACCTTTTAATAAAAGCAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001001238|solute carrier family 31 (copper transporters), member 1 [Xenopus (Silurana) tropicalis] MDHSHHTVTTSDPHGGHHHPTTSGNHGDHGGSMHMMQMTFYFGYENVEVLFTGLVINSAGEMAGAFVAVFLLALLYEGLKISREALLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQRMLSVPHLLQTLLHIIQVVVSYFLMLIFMTYNAYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH	Refseq >NP_001079733|solute carrier family 31 (copper transporters), member 1 [Xenopus laevis] MNHSHHMATTSDPHAGHQHPTTSGSHGDHGGGSGMHMMAMTFYFGYENVEVLFTGLVINSAGEMAGAFVAVFLLGLLYEGLKISREALLRKSQVSIRYNSMPVPGPNGTTLMETHKTVGQRMFSLPHMMQTLLHIIQVVVSYFLMLIFMTYNAYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH

Genomic		tropicalis
Genome Browser		Xenbase JGI Ensembl UCSC			Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.1914	Xl.28474
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		3 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	SLC31A1
mouse		MGI	Slc31a1	All(5) Targeted, knock Out(1) Targeted, other(4)
zebrafish		ZFIN	slc31a1

Publications
First:		Vertebrate Ctr1 coordinates morphogenesis and progenitor cell fate and regulates embryonic stem cell differentiation. [Proc Natl Acad Sci U S A 2007]
Most recent:		Xmc mediates Xctr1-independent morphogenesis in Xenopus laevis. [Dev Dyn 2009]
		View All Papers 1 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		copper ion transmembrane transporter activity
Biological:		copper ion transport
Cellular Component:		integral to membrane
EC:
KOG:		[P] Copper transporter

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.1914.1.S1_at
Affymetrix 2.0			Xl2.28474.1.S1_at

Symbol legend[+]

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