uxs1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (0)

Nucleotides (154)

Interactants (0)

XB-GENEPAGE-997576

[provisional- machine annotated only] Gene Symbol: uxs1 [Predicted: Source is Human Entrez Gene] Gene Name: UDP-glucuronate decarboxylase 1 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase Interactants:

XB-GENE-997577

XB-GENE-6486582

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene
mRNA		Refseq >NM_001006848\|Xenopus (Silurana) tropicalis UDP-glucuronate decarboxylase 1 (uxs1), mRNA CTGGTCCTGGGTTCCCCTGTTGCCGAGCTTTTTCCCTCCCCCCTACCCCCCTTTATTTAATTGCTCTACCGCCGGGTTCCATGTCACCGGCTTTGAGCCCAGCTTCTATACGTTGCCTGGCCGGTGATGGTGAGGACCCGGATCCAGCGGCTGCTGACTGGAATCAATAGGAGGATGATGAAGCTGCTCATTGCACTCGCCTTGATCGCCTATGTAGCCTCTGTTTGGGGAAATTTTGTCAATATGAGCAAGTCAATTCAAGAAAACGGGGAACAGAAAATGGAGAAAAAAATTGAAGAGGTCATTGCTCCTTTGAGAGAAAAAATACAAAATTTAGAAAGAAGTTTTACCCAAAAATATCCACCTGTGAAATTCTTGTCAGAAAAAGACAGAAAAAGAATACTGATAACTGGTGGTGCAGGCTTTGTGGGCTCTCATCTTACTGACAAGCTAATGATGGATGGGCATGAAGTTACCGTCGTGGACAATTTTTTTACAGGCAGGAAAAGAAATGTGGAACATTGGATTGGGCACGAGAACTTTGAGCTTATTAATCATGATGTTGTTGAGCCACTTTATATTGAAGTGGACCAGATATACCATTTGGCTTCTCCTGCTTCTCCTCCAAATTACATGTATAATCCCATAAAGACCCTTAAGACCAACACCATTGGAACACTTAACATGTTGGGCTTGGCAAAGCGTGTAGGTGCTCGGCTACTCCTGGCCTCTACTTCAGAAGTGTATGGAGATCCTGAAGTGCATCCTCAAAGTGAAGAGTACTGGGGGCATGTGAATCCTATAGGTCCACGAGCCTGCTACGATGAAGGGAAGAGAGTGGCAGAAACAATGTGCTATGCTTACATGAAGCAGGAAGGCGTAGAGGTTAGAGTGGCTCGAATATTTAATACCTTTGGCCCTCGAATGCATATGAACGATGGCAGAGTTGTCAGCAACTTTATTTTGCAAGCACTCCAGGGAGAACAACTAACGGTCTATGGTTCAGGAGAACAAACAAGAGCCTTTCAATATGTCAGTGACTTGGTAAATGGGCTTGTAGCTTTAATGAACAGCAATGTCAGCAGCCCTGTGAATTTGGGGAACCCACAAGAACACTCAATCGTACAGTTTGCCAGATTAATTAAGCAGCTTGTTGGTAGTGGAGGTGAGATCAGTTTTCTGTCAGAAGCTCAAGATGACCCTCAAAGGCGAAAACCCGACATCCGAAAGGCCAAGCTGTTACTTGGTTGGGAACCTGTGGTCCCGCTTGAGGAAGGCTTAAACAAAACTATCCATTACTTTAGAAAGGAGCTTGAACATCAAGCAAACAATCAATACATCCCCAAACCGAAGCCTGCAAGAGTAAAAAAAGGGCGAACGCGACACAACTGAACGCTCCATTAAGGATGGCTCTCTTGTCAAGTTACTGGATGTAAAAATATTTCTTACCCCTCTTTGGGTTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001006849\|UDP-glucuronic acid decarboxylase 1 [Xenopus (Silurana) tropicalis] MVRTRIQRLLTGINRRMMKLLIALALIAYVASVWGNFVNMSKSIQENGEQKMEKKIEEVIAPLREKIQNLERSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQANNQYIPKPKPARVKKGRTRHN UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.8401	Xl.7743 [+] Xl.57987
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	UXS1
mouse		MGI	Uxs1	All(3) Targeted, other(2) Targeted, knock Out(1)
zebrafish		ZFIN	uxs1	15 Lines(s)

Publications
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Most recent:
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Functional Ontologies
GO: Molecular:		catalytic activity dTDP-glucose 4,6-dehydratase activity
Biological:		nucleotide-sugar metabolic process
Cellular Component:
EC:		dTDP-glucose 4,6-dehydratase
KOG:		[GM] dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.8401.1.S1_a_at [+] Str.8401.1.S2_at	Xl.7743.1.S1_at [+] Xl.7743.2.S1_a_at
Affymetrix 2.0			Xl2.7743.3.S1_at [+] Xl2.7743.2.S1_a_at Xl2.7743.2.S1_at Xl2.7743.1.A1_at

Symbol legend[+]