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Summary Expression Gene Literature (8) GO Terms (9) Nucleotides (906) Proteins (51) Interactants (90) Wiki
XB-GENEPAGE-493263
Gene Symbol: col1a2

Gene Name: collagen type I alpha 2

Synonyms: mgc52958 , procollagen, type I, alpha 2 ( Add synonyms , Nomenclature history )

Gene Function: extracellular matrix structural constituent

Protein Function :

Interactants: Loading ...
Diseases:  Disease Ontology: osteogenesis imperfecta type 3 [+]

OMIM: OSTEOPOROSIS [+]

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
 
Xenbase Gene ID XB-GENE-493264 XB-GENE-493268 XB-GENE-17346116
Gene Symbol col1a2 col1a2.L col1a2.S
Chromosome scaffold_73 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 780175
380419
108719903
mRNA RefSeq RefSeq NCBI Nucleotide
Protein RefSeq TrEMBL TrEMBL TrEMBL RefSeq TrEMBL TrEMBL NCBI Protein
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine col1a2 col1a2.L col1a2.S
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL1A2 OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Col1a2 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR col1a2 ZFIN Ensembl
chicken
GEISHA COL1A2 Ensembl
fruit fly
worm
WORMBASE
Publications
First The Xenopus MEF2 gene family: evidence of a role for XMEF2C in larval tendon development., Dev Biol 2009                                                      
Most Recent Broad applicability of a streamlined ethyl cinnamate-based clearing procedure., Development 2019          
All View All Papers 1 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 9 terms 2 terms 0 term
PANTHER col1a2
KEGG Pathways K06236 K06236
KOG [W] Collagens (type IV and type XIII), and related proteins
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks col1a2
ORFs col1a2.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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