Gene Symbol: usp38 Gene Name: ubiquitin specific peptidase 38 Add Xenopus synonyms Gene Function: ubiquitin-specific protease Interactants:

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
			Entrez Gene
mRNA		Jgi mRNA >Xetro.A02813.1 CTGGGCGACTACGTGCGCGTCACTGCGCTTGCGTGTAGTCATGATGTCACAATCTCGCGTGATGAGACTTGCGGCGTCGGGATTTTCTGTGAGACAGGAGGCAAGGAGCTTGCAATTTAAGAGCTTTGCGGGACATATGCAGCATTTCAATCTCTCCAGCTCACAATGGACAAGATTCTGGAAGGATTGGTGACCTCTTCGCATCCATTAAATCTGAAAAAAGTCATAGTAAAGAAAGTTGTGGAATCAGCTGAAAATTCAGTCAGTGAAGAACAATGCAAGGCCATGTTTAGCCTTACTACTCGCTTAATCTTGGAAGGACAGGATCCCTTTCAGAAACAAGTTGGACACCAGGTGTTGGAAGCATATGCCAGATACCATCGGTCTGAATTTGAGAATTATTTCAACAGGAACTTTGTTTTGAGCCTTCTGCAAGAAGGATACAGATCATTAGAGCGCAAGGATGTTGCTATATTAGACTATATCCATAATGGGTTGAAACTGATTATGAGCTGTCCCTCCATTCTAGATATATTTTCAGTCCTACAGGTAGAAGTGTTGAGAATAGTCTGTGAAAGGCCAGAGCCATTTGTAGCTGCAAGATTAAGTGAACTGCTCACTGACTTTGTGCAGTGCATTCCCAAAGGGAAATTGTCCATCGCATTTTGCCAGCAACTCGTAAGGACAATTGGACATTTTCAGTGTATATCAACCTTTGAAAAGGAGCTGCGTGAATATGTGTCTCAAGTTACCAAAGTTAGTAATTTGCTTCAAAATATCTGGAAGGCTGAGCCGTGCACTTTGCTTCCATCGCTACAAGAGGTTTTCGCAATTATATCATCCACAGATGCTTCATTCGAACCTTCTGTGTCTTTAGCCAGCCTTGTTCAGCACATTCCCTTACAGCTGATCACTGTCCTCATCAGGAGTTTGACCACTGACCCCAATGTGAAAGATGCAAGTATGACTCAGGCTCTCTGCAGGATGATTGACTGGTTATCCTGGCCCCTTGCTCAACATGTGGAGACCTGGGTGATTGCTTTGCTGAAAGGACTAGCAGCTGTACAGAAATTTACTATCCTCATAGATGTTACTTTACAGAAAATTGAATTGGTATTTCATAGACTGTGGTTTCCCTTGGTAAGGCCTGGTGCTTTGGCTGTCCTCTCCCACATGTTGCTTAGCTTTCAGCATTCTCCTGAGGCTTTCCATATGGTTGTTCCTCATGTTGTGAGTCTGGTCCAGTCCTTTAAGAATGATGGTCTACCAACAATTACAACTTTCCTAGCGCAGTTTGCTGAGCTGATGCACTGTATGATTTACCATTTTTCTGGATTTCCAGACCTTTATGAGCCTATTCTAGAAGCACTTAAGGATCTGCCGAAACCCTCTGAAGAAAAAATTAAACTAACGCTAAATCAAAGTGCATGGACTTCTCAATCAAGTACTTTGGCATCTTTACCCAGATTGTCAGGAAAATCAGAAACTGGAAAAACTGGGCTCATTAACCTAGGGAACACATGTTACATGAACAGCGTTTTACAAGCTCTCTTTATGGCTACCGATTTTAGGAGGCAAGTGTTATCATTAAATCTGAATGGTACGAACTCTTTGATGAAGAAACTGCAGCACCTTTTTGCTTTCCTGGCTCACACTCAGCGAGAAGCTTATGCACCTCAAACATTTTTTGATGCTTCTAGACCACCATGGTTCACGCCACGATCGCAGCAAGACTGTTCTGAATACCTCAGGTTTCTTTTGGACAGATTGGATGAAGAAGAGAAAACCATTAAGGCTCTTTGTTCCAAACTGCCTTTGGATGCTTCAGTTCATGACTGTATTGTTGAAGAGTCTTCAGCTTCAGTCTCAGATGACATTTCTAATCACTATTGCACAAAGGGGAGCAAAGGCTGCGGCAATAAAGAAAAATCTTTAATAGAAAATATGTTTGGAGGAAAGCTACAAACTAATATTTGTTGTTTGAACTGCAGAAGTACTTCTCAGAAAAGAGAAGCTTTCACTGATCTTTCCCTGGCTTTTTGTCCTACCTTAGTTGACAAACCTGTACAGAGTACATTAGGGTCCCCTAAGCAAAAGGATGATGACGACTGTATAGAAACTGATATAGCTTCTTCTACACTTGCTCCTTCAACAGAAGATGTTAATGTTGGGCCTGAGAATGAAATATCTGAATGTGAAGAGGTGAAGACGAATGTCAGTTGCGTTTTAGACAACTCCGTATGTGCCAATGCAATTGAGTCTGATGAAATGCCAACCCAAAACAATAGACGTGAAAGAACACTGTCTGTTACAGACTTGCTGAACTATTTTCTGGCCCCTGAGATACTTGATGGTGATAATCAGTATTATTGTGAAAAGTGTGCTTCCCTTCAGAACGCTAAAAAGACTATGCAAATCATGGAAGAGCCAGAATATCTCATCCTAACACTACTACGGTTTTCATATGATCCAAAGTGTCACGTGAGGCGTAAGATCATGGATAATGTATCTATTCCTTTGGTGCTGGAATTGCCCGTAGAAAGAACTACCTCTCCAACTTCACCAGGAGATTGGACACTAGAAACTGACATCCCTGATGTTAGTGAGAATCTTGCTAAAAAGCTGAAGCCCTCTAATACAGAGGACCTTTGCTGTTCACACCCAGTACCCTATGTTTTAAGTTCTGTTGTGGTACATTCTGGCACATCATCTGAAAGTGGCCATTATTATTCATATGCCAGAAATGTTACAAGCACAGAAAGATGTCTTTATGCTGAGAAATCCTGCTATTCTCACGGTCAGCTGGTAGAAAGAGAAACTGGCAGCTCGGTTATGACACACAAAGACACACAATGCAATGATATCTCAAAGGAATGGTTTCTCTTTAATGACAGCAGAGTAACATTTACATCTTTCCAATCTGTTTTAAATATCACCAGTAGGTTTCCAAAGGACACTGCATATGTGCTTATATATAGAAAGCATAACTTTGGCAATTTAAATTGCATCCAGCCTAGTTCAGCAAATGGACTCTGGGTAAATGGTGAACCGCCACTTCAGAAGGAGCTCATGGATGCAATTACAAAAGATAATCTCCTATATTTACAGGAACAAGAACTTAACGCCCGCGCTCGTGCTCTGCAAAACACTTCCGCCTCCTGCTCATTTCGGCCTAATGGATTTGATGACAATGACCCTCCAGGGAGCTGTGGCCCCAGTGGAGGTGGTGGAGATGGAGGATTTAGCACCCTTGGCCGACTTGTCTTTTAATGAGGCAACAAGATACATATATACATTTTTTTTCTCTGAAGAATTGTGGAAAAATGCACTGAAGCCAACTCAATGGCCACATTGACTGTATAGTTTGTTTGGTATTGTTACCCTGTTGTTTTTCTAATGTCCATGAACACGTTAGGCAGCTTTATTTATTTCCTACAGAAAATCATAACTGATAGACACCTCTGTGGGCACAGATTAATACATTGCTGTCTTATCCGTAAAAGAGGTTGCCGAAAAGCTGCAGTAGATTCCTAATATAAATGCAGGCAACTGGATCCTACTATATCCTAGTGGGATCTGTTTTTTAATTTAGTCAGATCTGTATCTATTATATTGAACGCACTGTTTTTTTGGGGGGGGGGTTTTCGTCTTTAAAAGCTGAAAGCTTTATGGTGCATTTTATACCGAAAGCAATAATTTCCACATTTGTCTGCATTTTTTTCCCCTAAAGCAGGGTAATTACTTTCCTTTAAAATCTTACTAGTAAAGATATCTGAGGATGTGTGCGTATATACATTTATCAAATCACTTTTAAGGACATAGCATGTTCTGCTAAAAGCTTCTCCCCTGTGTTTTAACCATAAGAAAACTTTATAGTATTTCTATTTCAAGAATTTTTTGTTAAAAAAAAAAATAATTATACTTCAGGGAATACATCTGCTGTGTGACAGAGGGAAAGTAATTTATGTGCCTTGCAGTACTGTACATCAAGAATCCATTGGCTTGCAGAGTATCATGGGTTATATTCTACATTGTCAACATTACAATTTAAAGTTGCTTTTTCTTTAAAAGTAAAACAGTGGTCCTGTGTGTGTGTGTGTGTTAAAAACATTATTGCTTGAATATGTAAAAAGCAAAAAATCCCTGTCCCAGCATGAATATGAAATGTTTGTGATTTCTGAAAGTATAAAAGTGGCAAAACTGGTACAATCAATGCATATATGCGTGTATGGATTGCATGGTTTAAAAAATAATATAGCCCTAGATTTAGCTGCCCCAATAATGGGACAACATGCCCCAGAACTGAATATGAGCAAAATAAATAGGCCTTGTGGTAAAAAACCCCAAAAAAACAAAATCCTGTCCAAACAGAAAGTCACTAACTAGAAATGG	Refseq >NM_001094176|Xenopus laevis ubiquitin specific peptidase 38 (usp38), mRNA CGGAGACGTTCCACCGAGACGGTCACGTATTCGTGACGTCACCCACGGCCTCTTATCAACCGGGAACTAGCTGCTACCGTGATTTTTGGCAGACCCCGATGCAGCATTTGGATCTCTCCAGTTTACAATGGATAAGATTCTGGAAGGATTGGTGACCTCTTCGCATCCCTTAAATCTGAAAAAAGTCGTAGTAAAGAAAGTTGTGGAATCGGCTGAAAATTCAGTCAGTGAAGAACAATGCAAGGCCATGTTCAGCCTGACTACCCGCTTAATCCTGGAAGGACAGGATCCCTTTCAGAAGCAAGTTGGACACCAGGTGTTGGAAGCATATGCCAGATACCATCGGTCAGAATTTGAGAATTATTTCAACAGGAACTTTGTTTTGAGCCTTTTGCAGGAAGGATACAGAGCATTAGAGCGCAAGGATGTTGCTATATTAGACTATATCCATAACGGGCTGAAACTGATTATGAGCTGCCCCTCCATACTAGATATATTTTCAGTCCTACAGGTAGAAGTGCTGAGAATAGTCTGTGAAAGACCAGAGCCATCAGTAGCTGCAAGGTTAAGCGAACTGCTCACTGACTTTGTGCAGTGCATTCCCAAGGGGAAAATGTCCATTGCATTTTGCCAGCAACTCGTAAGGACAATTGGACATTTTCAGTGTATATCAACCTATGAAAAGAAGCTGCGCGAATATGTTTCTCAAGTTACCAAAGTTAGTAGTTTGCTTCAAAATATCTGGAAGGTTGAGCCATGCACTTTGCTTCCATCGCTACAAGAGGTTTTTGCAATTATTTCTTCCACAGATGCTTCATTTGAGCCGTCTGTTTCTCTAGCCAGCCTTGTTCAGCACATTCCCTTACAGCTGATCACTGTCCTCATCAGGAGTTTAACCACTGACCCCAACGTGAAAGATGCAAGTATGACTCAGGCTCTCTGCAGGATGATTGACTGGTTATCCTGGCCTCTTGCTCAACATGTCGAGACCTGGGTGATCGCTCTGCTAAAAGGGCTAGCAGCTGTACAGAAATTTACTATCCTTATAGATGTCACTTTACAGAAAATTGAACTGGTATTTCACAGACTGTGGTTTCCCCTGGTAAGGCCTGGTGCTTTGGCTGTCCTCTCCCACATGTTGCTCAGCTTTCAACATTCTCCTGAGGCTTTCCATATGGTTGTTCCTCATGTTGTGAGTCTGGTCCAGTCCTTTAAGAATGTTGGTCACCCAACAAGTACAACGTTCCTAGCTGAGTTTGCAGAGCTGATGCACTGCATGATTTACCATTATTCTGGATTTCCAGACCTTTATGAGCCTATTTTGGAAGCACTTAAGGATCTGCTGAAACCATCTGAAGAAAAAATGAAACTTACCCTAAATCAAAGTGCATGGACTTCTCAATCAAGTACTTTGGCATCTTTACCCAGATTGTCGGGAAAATCAGAAACTGGGAAAACTGGGCTCATTAACCTGGGGAACACGTGTTACATGAACAGCGTTTTACAGGCCCTCTTTATGGCTACCGATTTTAGGAGGCAAGTGTTATCATTAAATCTGAATGGCACCCACTCCTTGATGAAGAAACTGCAGCACCTTTTTGCTTTCCTGGCTCACACTCAGCGAGAAGCTTATGCACCGCAGATATTTTTTGATGCTTCTAGACCGCCATGGTTCACACCACGTTCCCAGCAAGACTGTTCTGAATATCTCAGGTTTCTTTTGGACAGACTGGATGAAGAAGAGAAAACCATTAAAGCTCTTTGTTCCAAATTGCCTTCAGATGCTCCAGTTACCGACTGCAGTGTTGTAGAATCTTCAGCTTCAGTCTCGGATGACATTTCTAATCACTATTGCACAAAAGAGAGCAAGGGCTGTGGCAATAAAGAAAAAACTTTAATAGAACATATGTTTGGAGGAAAGCTACAAACTAATATTTGTTGTTTGAACTGCAGAAGTACTTCACAGAAAAGGGAAGCCTTCACCGACCTTTCCCTCGCTTTCTGTCCTACCTTAGTTGACAAACCTGTACAGAGTACCCTAGACTCCCCAAAGCAAAAAGATGACGACTGTATAGAAATTGATATAACTCCTTCTGTTGAAGCTCCTTCTATACTTGCTCCTTCAACAGAAGATGTTACTGTTAGGCCAGCAAAAGACAAATCCGAATATGAAGTGAAGATGAATGACAATTGCGTTTTGGACAACTCTGAATGTGCAAATGCAGTTGAGTCTGATAACATGTCCGCCCAAAACAATAGAAGAGAAAAAACTATCTCTGTTACAGACTTGCTAAACTATTTTCTGGCCCCGGAGATCCTTGATGGTGATAATCAGTATTATTGTGAAAAGTGTGCTTCCCTTCAGAATGCTGAAAAGACTATGCAAATCATGGAAGAGCCAGAATACCTCATCCTAACACTACTACGGTTTTCATATGATCCAAAGTGTCATGTGAGGCGTAAGATCACAGATAATGTATCTATCCCTCTGGTGCTGGATTTGCCCATAGAAAGAACTACCTCTTCAACCTCACCAGCAGATTGGGCAATAGAAACTAACGTCCCTGATGTTACTGAGAATCTTGCTAAAAAGCTGAAGCCCTCGAATACAGAGGATCTTTGCTGTACACGTCTAGTACCTTATGTTTTAAGTTCTGTTGTGGTACATTCTGGCACATCATCTGAGAGTGGCCATTATTATTCATATGCCAGGAATGTTACAAGCTCAGAAAGATGTCTGTATGCTGAGAAATCCTGCTATTCTCATGGTCAGTTGGTAGGAAGAGAAACTGGCAGCTCAGTTATGACACACAATGACGCACAATGCAATGATATCTCCAAGGATTGGTTTCTCTTCAATGACAGCAGGGTAACGTTTACATCTTTCCAATCTGTTTTTAATATCACCAGTAGGTTTCCAAAGGACACTGCATATGTGCTTATTTATAGAAAGCATAACTTGGGCGATTTAAATCGCATCCAGTCTAGTTCAGCTAATGGACTCTGGGTAAATGGTGAACCACCACTTCAGAAGGAGCTCCTGGATGCTATTACAAAAGATAATCTTCTGTACTTACAGGAACAAGAACTTAATGCCCGCACTCGTGCTCTGCAAAACACTTCTGCCTCCTGCTCCTTTCGACCTAATGGATTTGATGACAACGACCCTCCAGGAAGCTGTGGCCCCAGTGGAGGTGGAGGAGATGGAGGATTTAGTACCCTTGGCAGACTTGTCTTTTAAATGAGGCGATGAGAATATACATATACAGGCAGCTTCATTTCCTGAAGAAAATTATTACGGATTGACACTTCTGTGGTCACAGATCAACACATTGTTGTCTTATCCCTAAAAGGGGTTGCAGAATAGCTGACTATAAATGCAGGCAACTGGATGCTACTGGATGCCGGTCCGTTTTTTTTTTTATTCAGTATGTGGACAGGTCCGTATCTCTTCTATCAAACGCACTGGTCTTTGGGGGAAGGGGGGTTTCCTTATTTAAAAGTTGAAAGCTTTATGGTGCATTTTATACCGAAAGCAATAATCTACACTTTTGTCTGCATTCTTGTTTTCCTAAATCAGGGTGATTCCTTAAAATCTTACTAGTAAAGATATCAGATGATGCGTGTGTATATACATTAATCAAATCACTTGTAAGGACATTGCATGTTCTGCTAAAAGCTCCCCCCCCCCCATTGTTTTTACCATAAGAAAACTTTATAGTATTTCTATTTCGAGAATTTTGTTTTTAAAAATTCTACTTCAGGGAATACATCTGCTGTGTGACAGAGGGAAAGTAATTTATGTGCCTTGCAGTACTGTAAGTGAAGAATCCATTGGCTTGTAGAATGTCATGGGTTCTATTCTACGTTGTCAACATTACAATTTAAATTTGCTTTTTTGTTTAAAGTAAAACAGTGGTTCCATGAAAAAAAAAAAAAAAAAAAAAA
Protein		Jgi protein >Xetro.A02813.1 MDKILEGLVTSSHPLNLKKVIVKKVVESAENSVSEEQCKAMFSLTTRLILEGQDPFQKQVGHQVLEAYARYHRSEFENYFNRNFVLSLLQEGYRSLERKDVAILDYIHNGLKLIMSCPSILDIFSVLQVEVLRIVCERPEPFVAARLSELLTDFVQCIPKGKLSIAFCQQLVRTIGHFQCISTFEKELREYVSQVTKVSNLLQNIWKAEPCTLLPSLQEVFAIISSTDASFEPSVSLASLVQHIPLQLITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILIDVTLQKIELVFHRLWFPLVRPGALAVLSHMLLSFQHSPEAFHMVVPHVVSLVQSFKNDGLPTITTFLAQFAELMHCMIYHFSGFPDLYEPILEALKDLPKPSEEKIKLTLNQSAWTSQSSTLASLPRLSGKSETGKTGLINLGNTCYMNSVLQALFMATDFRRQVLSLNLNGTNSLMKKLQHLFAFLAHTQREAYAPQTFFDASRPPWFTPRSQQDCSEYLRFLLDRLDEEEKTIKALCSKLPLDASVHDCIVEESSASVSDDISNHYCTKGSKGCGNKEKSLIENMFGGKLQTNICCLNCRSTSQKREAFTDLSLAFCPTLVDKPVQSTLGSPKQKDDDDCIETDIASSTLAPSTEDVNVGPENEISECEEVKTNVSCVLDNSVCANAIESDEMPTQNNRRERTLSVTDLLNYFLAPEILDGDNQYYCEKCASLQNAKKTMQIMEEPEYLILTLLRFSYDPKCHVRRKIMDNVSIPLVLELPVERTTSPTSPGDWTLETDIPDVSENLAKKLKPSNTEDLCCSHPVPYVLSSVVVHSGTSSESGHYYSYARNVTSTERCLYAEKSCYSHGQLVERETGSSVMTHKDTQCNDISKEWFLFNDSRVTFTSFQSVLNITSRFPKDTAYVLIYRKHNFGNLNCIQPSSANGLWVNGEPPLQKELMDAITKDNLLYLQEQELNARARALQNTSASCSFRPNGFDDNDPPGSCGPSGGGGDGGFSTLGRLVF*	Refseq >NP_001087645|ubiquitin specific peptidase 38 [Xenopus laevis] MDKILEGLVTSSHPLNLKKVVVKKVVESAENSVSEEQCKAMFSLTTRLILEGQDPFQKQVGHQVLEAYARYHRSEFENYFNRNFVLSLLQEGYRALERKDVAILDYIHNGLKLIMSCPSILDIFSVLQVEVLRIVCERPEPSVAARLSELLTDFVQCIPKGKMSIAFCQQLVRTIGHFQCISTYEKKLREYVSQVTKVSSLLQNIWKVEPCTLLPSLQEVFAIISSTDASFEPSVSLASLVQHIPLQLITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILIDVTLQKIELVFHRLWFPLVRPGALAVLSHMLLSFQHSPEAFHMVVPHVVSLVQSFKNVGHPTSTTFLAEFAELMHCMIYHYSGFPDLYEPILEALKDLLKPSEEKMKLTLNQSAWTSQSSTLASLPRLSGKSETGKTGLINLGNTCYMNSVLQALFMATDFRRQVLSLNLNGTHSLMKKLQHLFAFLAHTQREAYAPQIFFDASRPPWFTPRSQQDCSEYLRFLLDRLDEEEKTIKALCSKLPSDAPVTDCSVVESSASVSDDISNHYCTKESKGCGNKEKTLIEHMFGGKLQTNICCLNCRSTSQKREAFTDLSLAFCPTLVDKPVQSTLDSPKQKDDDCIEIDITPSVEAPSILAPSTEDVTVRPAKDKSEYEVKMNDNCVLDNSECANAVESDNMSAQNNRREKTISVTDLLNYFLAPEILDGDNQYYCEKCASLQNAEKTMQIMEEPEYLILTLLRFSYDPKCHVRRKITDNVSIPLVLDLPIERTTSSTSPADWAIETNVPDVTENLAKKLKPSNTEDLCCTRLVPYVLSSVVVHSGTSSESGHYYSYARNVTSSERCLYAEKSCYSHGQLVGRETGSSVMTHNDAQCNDISKDWFLFNDSRVTFTSFQSVFNITSRFPKDTAYVLIYRKHNLGDLNRIQSSSANGLWVNGEPPLQKELLDAITKDNLLYLQEQELNARTRALQNTSASCSFRPNGFDDNDPPGSCGPSGGGGDGGFSTLGRLVF

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene			[+] Xl.21303
Unigene EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human			USP38
mouse		MGI	Usp38	All(2) Targeted, other(2)
zebrafish			usp38

Publications
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Most recent:
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Functional Ontologies
GO: Molecular:		cysteine-type endopeptidase activity ubiquitin thiolesterase activity
Biological:		ubiquitin-dependent protein catabolic process
Cellular Component:
EC:		ubiquitin thiolesterase
KOG:		[O] Ubiquitin-specific protease

Reagents		tropicalis	laevis
Clones
Affymetrix 1.0		Str.10104.1.A1_at	Xl.21303.1.A1_at
Affymetrix 2.0			Xl2.48948.1.S1_at [+] Xl2.21303.1.A1_at

Symbol legend[+]

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