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Summary Expression Gene Literature (48) GO Terms (33) Nucleotides (626) Proteins (34) Interactants (1124) Wiki
XB-GENEPAGE-479582
Gene Symbol: hdac1

Gene Name: histone deacetylase 1

Synonyms: HD1 , rpd3 , gon-10 , rpd3l1 , hdac1-a , hdac1-b ( Add synonyms , Nomenclature history )

Gene Function: regulation of gene expression

Protein Function :
Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an importan...[+]


Interactants: Loading ...
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Xenbase Gene ID XB-GENE-479583 XB-GENE-6252325 XB-GENE-865283
Gene Symbol hdac1 hdac1.L hdac1.S
Chromosome Chr02 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene: 594953
Entrez Gene: 397868
Entrez Gene: 379083
mRNA RefSeq RefSeq RefSeq
Protein RefSeq TrEMBL TrEMBL RefSeq Swiss-Prot TrEMBL RefSeq TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine hdac1 hdac1.L hdac1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards HDAC1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Hdac1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR hdac1 ZFIN Ensembl
chicken
GEISHA HDAC1 Ensembl
fruit fly
FLYBASE HDAC1 Ensembl
worm
WORMBASE
Publications
First Expression cloning of Siamois, a Xenopus homeobox gene expressed in dorsal-vegetal cells of blastulae and able to induce a complete secondary axis., Cell 1995                
Most Recent FoxN3 is necessary for the development of the interatrial septum, the ventricular trabeculae and the muscles at the head/trunk interface in the African clawed frog, Xenopus laevis (Lissamphibia: Anura: Pipidae)., Dev Dyn 2019            
All View All Papers 4 paper(s) referencing morpholinos 4 paper(s) referencing OMIMs 6 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 31 terms 6 terms 6 terms
PANTHER hdac1
KEGG Pathways K06067 K06067 K06067
KOG [B] Histone deacetylase complex, catalytic component RPD3
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Horizon Horizon Horizon
Antibody hdac1 Ab1 hdac1 Ab1 hdac1 Ab1
Morpholino hdac1 MO1 , hdac1 MO2 , hdac1 MO3 hdac1 MO1 , hdac1 MO2 , hdac1 MO3 hdac1 MO1 , hdac1 MO2 , hdac1 MO3
ORF hdac1 ORF1 hdac1.S ORF1
Affymetrix 1.0 Str.39928.1.S1_a_at [+] Xl.1114.1.S1_at Xl.20805.1.S1_at [+]
Affymetrix 2.0 Xl2.1114.1.S1_at Xl2.20805.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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