Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (7) Nucleotides (119) Proteins (47) Interactants (94) Wiki
XB-GENEPAGE-1003599

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for top3a - All

Models - Gene (26)
Models - mRNA (35)
mRNAs (5)
ESTs (22)

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g014125 X. tropicalis
NCBI 10.1 XBXL10_1g41421 X. laevis.L
ENSEMBL 10.0 top3a X. tropicalis
JGI 9.1 Xelaev18045560m.g X. laevis.L
Xenbase 9.1 gene6885 X. tropicalis
Xenbase 9.2 gene15473 X. laevis.L
ENSEMBL 9.1 top3a X. tropicalis
JGI 8.0 Xetrov14038857m.g X. tropicalis
JGI 7.1 Xetro.I01568 X. tropicalis
JGI 7.2 Xelaev16071339m.g X. laevis.L
JGI 6.0 XeXenL6RMv10016426m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005765 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740048 X. tropicalis
JGI 4.1 e_gw1.174.173.1 X. tropicalis
JGI 4.1 e_gw1.174.202.1 X. tropicalis
JGI 4.1 e_gw1.174.266.1 X. tropicalis
JGI 4.1 gw1.174.173.1 X. tropicalis
JGI 4.1 gw1.174.202.1 X. tropicalis
JGI 4.1 gw1.174.266.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740202 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740266 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000021 X. tropicalis

Models - mRNA (35)

Source Version Model Species
NCBI 10.0 mRNA069904 X. tropicalis
NCBI 10.1 XBmRNA78157 X. laevis.L
ENSEMBL 10.0 ENSXETT00000094193 X. tropicalis
ENSEMBL 10.0 ENSXETT00000012696 X. tropicalis
JGI 9.1 Xelaev18045560m X. laevis.L
Xenbase 9.1 rna22218 X. tropicalis
Xenbase 9.2 rna45166 X. laevis.L
ENSEMBL 9.1 ENSXETT00000094193 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087080 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072755 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091497 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012696 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081854 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086482 X. tropicalis
JGI 8.0 Xetrov14038857m X. tropicalis
JGI 7.1 Xetro.I01568.2 X. tropicalis
JGI 7.1 Xetro.I01568.1 X. tropicalis
JGI 7.2 Xelaev16071339m X. laevis.L
JGI 6.0 XeXenL6RMv10016426m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1740048 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012696 X. tropicalis
JGI 4.1 e_gw1.174.173.1 X. tropicalis
JGI 4.1 e_gw1.174.202.1 X. tropicalis
JGI 4.1 e_gw1.174.266.1 X. tropicalis
JGI 4.1 gw1.174.173.1 X. tropicalis
JGI 4.1 gw1.174.202.1 X. tropicalis
JGI 4.1 gw1.174.266.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740202 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740266 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000021 X. tropicalis

mRNAs (5)

Clone Accession Species Library Anatomy Stage
IMAGE:8917144 BC157663 X. tropicalis NICHD_XGC_tropTe1 testis frog
XM_004918070 X. tropicalis
IMAGE:5161697 BC073221 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001092230 X. laevis.L
XM_018234323 X. laevis.L

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7688315 CX910550 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689138 CX913083 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8917144 EL830548 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8886843 EL843862 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas135i19 AL957672 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112h08 AL962567 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135i19 BX758773 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA064h08 CR413849 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7689138 CX913082 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7847049 DT530870 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8917144 EL830549 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8886843 EL843863 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:3549365 BG730914 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:5162049 BQ397801 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:5161697 CA791502 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6326805 CA974263 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7296532 CO384844 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
PBX0159A10 AW646024 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3549365 BG554209 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3549365 BG554580 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:5162049 BQ397800 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:7296532 CO384811 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9