Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (0) GO Terms (4) Nucleotides (115) Proteins (36) Interactants (61) Wiki
XB-GENEPAGE-1004062

All tropicalis laevis

Nucleotide sequences for rfxank - All

Models - Gene (23)
Models - mRNA (25)
Unigene Clusters (1)
Gurdon EST Clusters (2)
mRNAs (8)
ESTs (26)

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g017619 X. tropicalis
Xenbase 9.1 gene31125 X. tropicalis
JGI 9.1 Xelaev18001152m.g X. laevis.S
Xenbase 9.2 gene19905 X. laevis.S
JGI 8.0 Xetrov14003014m.g X. tropicalis
JGI 7.1 Xetro.A02288 X. tropicalis
JGI 7.2 Xelaev16053923m.g X. laevis.S
JGI 6.0 XeXenL6RMv10026081m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2020042 X. tropicalis
JGI 4.1 e_gw1.202.11.1 X. tropicalis
JGI 4.1 e_gw1.202.154.1 X. tropicalis
JGI 4.1 e_gw1.202.57.1 X. tropicalis
JGI 4.1 gw1.202.11.1 X. tropicalis
JGI 4.1 gw1.202.154.1 X. tropicalis
JGI 4.1 gw1.202.57.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2020022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020154 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2020017 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_202000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_202000042 X. tropicalis

Models - mRNA (25)

Source Version Model Species
NCBI 10.0 mRNA086934 X. tropicalis
JGI 9.1 Xelaev18001152m X. laevis.S
Xenbase 9.1 rna59316 X. tropicalis
Xenbase 9.2 rna58126 X. laevis.S
JGI 8.0 Xetrov14003014m X. tropicalis
JGI 7.1 Xetro.A02288.3 X. tropicalis
JGI 7.1 Xetro.A02288.2 X. tropicalis
JGI 7.1 Xetro.A02288.1 X. tropicalis
JGI 7.2 Xelaev16053923m X. laevis.S
JGI 6.0 XeXenL6RMv10026081m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_2020042 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028571 X. tropicalis
JGI 4.1 e_gw1.202.11.1 X. tropicalis
JGI 4.1 e_gw1.202.154.1 X. tropicalis
JGI 4.1 e_gw1.202.57.1 X. tropicalis
JGI 4.1 gw1.202.11.1 X. tropicalis
JGI 4.1 gw1.202.154.1 X. tropicalis
JGI 4.1 gw1.202.57.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2020022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020154 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2020017 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_202000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_202000042 X. tropicalis

Gurdon EST Clusters (2)

ID Species
1012155247 X. tropicalis
1012778120 X. laevis.S

mRNAs (8)

Clone Accession Species Library Anatomy Stage
XM_004911024 X. tropicalis
XM_002936327 X. tropicalis
XM_004911023 X. tropicalis
XM_018097694 X. tropicalis
XM_018239839 X. laevis.S
IMAGE:6861098 BC094187 X. laevis.S
NM_001095942 X. laevis.S
XM_018239838 X. laevis.S

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7593690 CX330427 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613911 CX389658 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596221 CX336543 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7557764 CX496462 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7737044 DN024300 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7529113 CX426036 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA002j23 CR447393 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA034b09 CR426372 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas132i08 AL969230 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas121e14 AL957367 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas048d13 AL651099 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA052b16 BX719470 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:4440989 BG511881 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7596221 DR891087 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7737044 DN024299 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7557764 CX496461 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7613911 CX389657 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593690 CX330426 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA002j23 CR447394 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas132i08 BX761231 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas121e14 AL957366 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA052b16 BX719471 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:4440989 BG512561 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:6863372 CA986852 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6632725 BU907525 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
PBX0079C08 AW639163 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.16.0
Major funding for Xenbase is provided by grant P41 HD064556