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Summary Expression Phenotypes Gene Literature (6) GO Terms (3) Nucleotides (232) Proteins (58) Interactants (303) Wiki
XB-GENEPAGE-1005535

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trim28 - All

Models - Gene (30)
Models - mRNA (35)
mRNAs (10)
ESTs (121)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g006155 X. tropicalis
NCBI 10.1 XBXL10_1g31473 X. laevis.L
NCBI 10.1 XBXL10_1g33568 X. laevis.S
ENSEMBL 10.0 trim28 X. tropicalis
JGI 9.1 Xelaev18035836m.g X. laevis.L
JGI 9.1 Xelaev18037633m.g X. laevis.S
Xenbase 9.1 gene19818 X. tropicalis
Xenbase 9.2 gene6587 X. laevis.L
Xenbase 9.2 gene42177 X. laevis.S
ENSEMBL 9.1 trim28 X. tropicalis
JGI 8.0 Xetrov14031102m.g X. tropicalis
JGI 7.1 Xetro.G01719 X. tropicalis
JGI 7.2 Xelaev16059908m.g X. laevis.L
JGI 6.0 XeXenL6RMv10007690m.g X. laevis.L
JGI 6.0 XeXenL6RMv10018145m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019245 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050030 X. tropicalis
JGI 4.1 e_gw1.305.104.1 X. tropicalis
JGI 4.1 e_gw1.305.135.1 X. tropicalis
JGI 4.1 e_gw1.305.269.1 X. tropicalis
JGI 4.1 gw1.305.104.1 X. tropicalis
JGI 4.1 gw1.305.135.1 X. tropicalis
JGI 4.1 gw1.305.269.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3050044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050104 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050269 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000032 X. tropicalis

Models - mRNA (35)

Source Version Model Species
NCBI 10.0 mRNA030431 X. tropicalis
NCBI 10.1 XBmRNA59486 X. laevis.L
NCBI 10.1 XBmRNA63354 X. laevis.S
ENSEMBL 10.0 ENSXETT00000092878 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087721 X. tropicalis
JGI 9.1 Xelaev18035836m X. laevis.L
JGI 9.1 Xelaev18037633m X. laevis.S
Xenbase 9.1 rna41205 X. tropicalis
Xenbase 9.2 rna19277 X. laevis.L
Xenbase 9.2 rna84939 X. laevis.S
ENSEMBL 9.1 ENSXETT00000087721 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092878 X. tropicalis
ENSEMBL 9.1 ENSXETT00000041702 X. tropicalis
JGI 8.0 Xetrov14031102m X. tropicalis
JGI 7.1 Xetro.G01719.1 X. tropicalis
JGI 7.1 Xetro.G01719.2 X. tropicalis
JGI 7.2 Xelaev16059908m X. laevis.L
JGI 6.0 XeXenL6RMv10007690m X. laevis.L
JGI 6.0 XeXenL6RMv10018145m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3050030 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041699 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041702 X. tropicalis
JGI 4.1 e_gw1.305.104.1 X. tropicalis
JGI 4.1 e_gw1.305.135.1 X. tropicalis
JGI 4.1 e_gw1.305.269.1 X. tropicalis
JGI 4.1 gw1.305.104.1 X. tropicalis
JGI 4.1 gw1.305.135.1 X. tropicalis
JGI 4.1 gw1.305.269.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3050044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050104 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050269 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000032 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
XM_002937602 X. tropicalis
XM_031905703 X. tropicalis
IMAGE:7975037 BC110746 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:6865549 BC081038 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001096457 X. laevis.L
XM_018228016 X. laevis.S
XM_018228015 X. laevis.S
XM_018224639 X. laevis.L
XM_018224637 X. laevis.L
XM_018224636 X. laevis.L

ESTs (121)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas056n23 AL672475 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7553736 CX492426 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7636334 CX406497 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791240 CX324785 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO10444 CX959673 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs24H01 CN084760 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8906150 EL798355 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:9011358 EL856006 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7693728 CX921490 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694495 CX922570 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7801940 DR835501 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7550354 CX509044 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551807 CX511426 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533151 CX433903 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7600943 CX363880 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7547504 CX489067 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7514503 CX744466 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7649678 CX810245 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas047h08 AL646323 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103j21 AL958374 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109d21 AL956708 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas094a16 AL968297 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA023k05 CR435410 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039k14 CR439314 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA047i11 BX730696 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA027j24 BX732058 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA058m11 BX734343 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu121h20 AL788375 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117i19 AL791110 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120p21 AL792093 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115b18 AL794310 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115g03 AL797511 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu088e18 AL800314 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126g22 AL803940 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098k23 AL805649 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335908 BQ520606 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5380847 BQ525483 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6987217 CF221362 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9011358 EL856007 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
CAAO10444 CX959672 3' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs24H01 CN084759 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8906150 EL798356 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7801940 DR835500 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7694495 CX922569 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7533151 CX433902 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547504 CX489066 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553736 CX492425 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550354 CX509043 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551807 CX511425 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7512210 CX740780 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7514503 CX744465 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7649678 CX810244 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas103j21 BX754525 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA023k05 CR435411 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039k14 CR439315 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7791240 CX324784 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600943 CX363879 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu120p21 BX697877 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121h20 BX700745 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115b18 BX701416 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126g22 BX701652 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117i19 BX701755 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA047i11 BX730697 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA027j24 BX732059 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA058m11 BX734344 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu088e18 BX690118 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098k23 BX694782 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115g03 BX694949 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335908 BQ520605 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xl226p16 DC101750 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl328p24 DC131739 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl262h19 DC112480 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl235c08 DC104204 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7981881 DR728515 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8544798 EB477903 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
p5f4 AU244739 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
xlk8h11ex DC062059 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk104d16ex DC036983 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL451i09ex BP686528 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL513a12ex BP704812 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7982432 DR714704 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7977225 DR718497 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7975037 DR727725 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL154c20 BJ096506 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL413g01ex BP673303 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL482f21ex BP697663 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL486f19ex BP698987 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL007l12 BJ031554 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL009p17 BJ041195 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL012g10 BJ029418 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL086b09 BJ066422 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060g01 BJ058748 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052f02 BJ069272 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0088F12 AW639885 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5154844 CA792049 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865549 CA793614 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL013c23 BJ029683 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL016j12 BJ032410 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL036g12 BJ036449 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15