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Summary Expression Phenotypes Gene Literature (5) GO Terms (25) Nucleotides (205) Proteins (54) Interactants (469) Wiki
XB-GENEPAGE-1005973

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cbx1 - All

RefSeq mRNAs(7)
Models - Gene (35)
Models - mRNA (37)
mRNAs (9)
ESTs (85)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001017150 NM_001017150.2 chromobox protein homolog 1 1484 bp NP_001017150 X. tropicalis
NM_001092810 NM_001092810.1 chromobox 1 S homeolog 1441 bp NP_001086279 X. laevis.S
XM_018237486 XM_018237486.2 chromobox 1 S homeolog isoform X1 1601 bp XP_018092975 X. laevis.S
XM_018237487 XM_018237487.2 chromobox 1 S homeolog isoform X2 1381 bp XP_018092976 X. laevis.S
XM_018234761 XM_018234761.2 chromobox protein homolog 1 1391 bp XP_018090250 X. laevis.L
XM_018234762 XM_018234762.2 chromobox protein homolog 1 1389 bp XP_018090251 X. laevis.L
XM_041576170 XM_041576170.1 XP_041432104.1 chromobox protein homolog 1 1389 bp XP_041432104 X. laevis.L

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g42283 X. laevis.S
NCBI 10.1 XBXL10_1g39058 X. laevis.L
NCBI 10.0 XBXT10g003873 X. tropicalis
ENSEMBL 10.0 cbx1 X. tropicalis
Xenbase 9.2 gene19359 X. laevis.S
Xenbase 9.2 gene4970 X. laevis.L
JGI 9.1 Xelaev18043218m.g X. laevis.L
JGI 9.1 Xelaev18045979m.g X. laevis.S
Xenbase 9.1 gene5633 X. tropicalis
ENSEMBL 9.1 cbx1 X. tropicalis
JGI 8.0 Xetrov14041309m.g X. tropicalis
JGI 7.2 Xelaev16009247m.g X. laevis.S
JGI 7.1 Xetro.J00754 X. tropicalis
JGI 6.0 XeXenL6RMv10024947m.g X. laevis.S
JGI 6.0 XeXenL6RMv10046415m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021962 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340089 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340128 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340154 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3340006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3340016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3340008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_334000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_334000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3340010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_334000008 X. tropicalis
JGI 4.1 gw1.334.89.1 X. tropicalis
JGI 4.1 gw1.334.157.1 X. tropicalis
JGI 4.1 gw1.334.131.1 X. tropicalis
JGI 4.1 e_gw1.334.89.1 X. tropicalis
JGI 4.1 e_gw1.334.157.1 X. tropicalis
JGI 4.1 e_gw1.334.131.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3340017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000017 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA73680 X. laevis.L
NCBI 10.1 XBmRNA79491 X. laevis.S
ENSEMBL 10.0 ENSXETT00000047517 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119153 X. tropicalis
NCBI 10.0 mRNA019506 X. tropicalis
Xenbase 9.2 rna56560 X. laevis.S
Xenbase 9.2 rna14523 X. laevis.L
Xenbase 9.1 rna18278 X. tropicalis
JGI 9.1 Xelaev18043218m X. laevis.L
JGI 9.1 Xelaev18045979m X. laevis.S
ENSEMBL 9.1 ENSXETT00000047517 X. tropicalis
JGI 8.0 Xetrov14041309m X. tropicalis
JGI 7.2 Xelaev16009247m X. laevis.S
JGI 7.1 Xetro.J00754.2 X. tropicalis
JGI 7.1 Xetro.J00754.1 X. tropicalis
JGI 6.0 XeXenL6RMv10046415m X. laevis.S
JGI 6.0 XeXenL6RMv10024947m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_3340010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3340008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3340017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3340016 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3340006 X. tropicalis
JGI 4.1 e_gw1.334.89.1 X. tropicalis
JGI 4.1 e_gw1.334.157.1 X. tropicalis
JGI 4.1 e_gw1.334.131.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047517 X. tropicalis
JGI 4.1 gw1.334.157.1 X. tropicalis
JGI 4.1 gw1.334.89.1 X. tropicalis
JGI 4.1 gw1.334.131.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_334000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_334000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_334000006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340154 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340128 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340089 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TEgg130i17 CR760924 X. tropicalis
NM_001017150 X. tropicalis
IMAGE:7019627 BC074418 X. laevis.S
NM_001092810 X. laevis.S
XM_018237486 X. laevis.S
XM_018237487 X. laevis.S
XM_018234761 X. laevis.L
XM_018234762 X. laevis.L
XM_041576170 X. laevis.L

ESTs (85)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu143d04 AL796168 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu142j21 AL795633 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076g06 AL782152 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu033d01 AL656745 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030j13 AL656387 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st10c23 DC165646 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st104o03 DC191715 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st105o03 DC191958 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st110m04 DC194579 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7609338 CX410787 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614220 CX390315 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7573049 CX435903 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7744487 DN038225 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7542585 CX449771 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7673479 CX882969 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7539360 CX452612 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs23E15 CN083704 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7570304 CX454603 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519436 CX479530 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:4461869 BG815985 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7558869 CX498151 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7622274 CX371082 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607126 CX367630 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT829 CX359711 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585389 CX317731 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA037l08 BX745229 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8869855 EL710618 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
TTpA058n12 BX729272 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA069i02 CR436908 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA046d06 CR425157 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA015o20 CR415537 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004g14 CR414097 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA007l12 CR410846 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA058n12 BX729273 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7542585 CX449770 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539360 CX452611 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570304 CX454602 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558869 CX498150 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA007l12 CR410847 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA015o20 CR415538 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7585389 CX317730 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT829 CX359710 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622274 CX371081 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614220 CX390314 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609338 CX410786 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs23E15 CN083703 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7673479 CX882968 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7744487 DN038224 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
XL500p02ex BP701270 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL018k04 BJ036165 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL037e01 BJ036732 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8322344 DY552012 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL454n10ex BP687633 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL438j12ex BP681721 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL420d21ex BP675870 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL215f14 BJ626584 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL417o20ex BP674840 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl287e05 DC119540 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl279l11 DC117458 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl239l13 DC105632 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8535435 EB472193 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL078m07 BJ064226 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7296927 CO386355 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6326004 CA973688 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
xlk78h17ex DC060478 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL517c14ex BP706209 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL015e16 BJ032002 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7977353 DR715409 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982771 DR729284 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL015e16 BJ047039 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL018k04 BJ048075 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl287e05 DC084784 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL417o20ex BP712387 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl279l11 DC082758 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl239l13 DC071352 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7296927 CO386281 3' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL438j12ex BP718109 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl237h24 DC070694 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL420d21ex BP713267 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL215f14 BJ642956 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL454n10ex BP723074 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL500p02ex BP734240 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL517c14ex BP738655 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl320n21 DC093496 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk78h17ex DC027004 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5