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Summary Expression Phenotypes Gene Literature (60) GO Terms (9) Nucleotides (257) Proteins (52) Interactants (557) Wiki
XB-GENEPAGE-1006487

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sod1 - All

Models - Gene (34)
Models - mRNA (34)
mRNAs (10)
ESTs (121)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g017882 X. tropicalis
NCBI 10.1 XBXL10_1g9120 X. laevis.S
NCBI 10.1 XBXL10_1g6289 X. laevis.L
ENSEMBL 10.0 sod1 X. tropicalis
JGI 9.1 Xelaev18014289m.g X. laevis.S
JGI 9.1 Xelaev18011510m.g X. laevis.L
Xenbase 9.1 gene5763 X. tropicalis
Xenbase 9.2 gene16302 X. laevis.S
Xenbase 9.2 gene391 X. laevis.L
JGI 7.1 Xetro.B02146 X. tropicalis
JGI 7.2 Xelaev16068107m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032400m.g X. laevis.S
JGI 6.0 XeXenL6RMv10037273m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032400m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007350 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3740010 X. tropicalis
JGI 4.1 e_gw1.374.91.1 X. tropicalis
JGI 4.1 e_gw1.374.92.1 X. tropicalis
JGI 4.1 e_gw1.374.93.1 X. tropicalis
JGI 4.1 gw1.374.91.1 X. tropicalis
JGI 4.1 gw1.374.92.1 X. tropicalis
JGI 4.1 gw1.374.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3740011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740091 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740092 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740093 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3740003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3740011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3740005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_374000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_374000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_374000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_374000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_374000005 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA088197 X. tropicalis
NCBI 10.1 XBmRNA11798 X. laevis.L
NCBI 10.1 XBmRNA16970 X. laevis.S
ENSEMBL 10.0 ENSXETT00000105673 X. tropicalis
JGI 9.1 Xelaev18011510m X. laevis.L
JGI 9.1 Xelaev18014289m X. laevis.S
Xenbase 9.1 rna18662 X. tropicalis
Xenbase 9.2 rna1135 X. laevis.L
Xenbase 9.2 rna47610 X. laevis.S
JGI 7.1 Xetro.B02146.1 X. tropicalis
JGI 7.2 Xelaev16068107m X. laevis.S
JGI 6.0 XeXenL6RMv10032400m X. laevis.S
JGI 6.0 XeXenL6RMv10032400m X. laevis.L
JGI 6.0 XeXenL6RMv10037273m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_3740010 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015994 X. tropicalis
JGI 4.1 e_gw1.374.91.1 X. tropicalis
JGI 4.1 e_gw1.374.92.1 X. tropicalis
JGI 4.1 e_gw1.374.93.1 X. tropicalis
JGI 4.1 gw1.374.91.1 X. tropicalis
JGI 4.1 gw1.374.92.1 X. tropicalis
JGI 4.1 gw1.374.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3740011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740091 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740092 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740093 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3740003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3740011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3740005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_374000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_374000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_374000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_374000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_374000005 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
NM_001016252 X. tropicalis
TGas107m24 CR761750 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7864719 BC121540 X. tropicalis
IMAGE:4057807 BC130043 X. laevis.S
IMAGE:7204829 BC122466 X. laevis.S
IMAGE:7208186 BC108610 X. laevis.S
pX1SODcDNA.2 X16585 X. laevis.S
X1SODB.1 X51518 X. laevis.L
NM_001372113 X. laevis.L
NM_001372114 X. laevis.S

ESTs (121)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9012561 EL858123 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9012030 EL857204 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011747 EL856339 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922429 EL836840 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913773 EL825553 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8907558 EL801188 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8926436 EL673295 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8869818 EL711019 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867376 EL706126 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867279 EL705774 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8866817 EL705185 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8864728 EL702043 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8932799 EL639417 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xtbs08C18 CN093496 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs06C15 CN092004 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs35B18 CN091832 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs32F03 CN089981 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26B18 CN086145 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs23F19 CN084061 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22C11 CN082990 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19C18 CN081304 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18A07 CN080433 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs17H11 CN080158 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs12H19 CN076905 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st24c11 DC170013 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8945080 EG653267 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XZT1193 CX360249 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593864 CX330620 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593640 CX330412 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7850133 DT388302 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7558377 CX497408 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7804477 DR839825 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7736178 DN022843 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720794 CX995694 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716084 CX976702 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7698602 CX931002 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7673499 CX882774 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7651147 CX812457 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA023h08 CR572435 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA023g07 CR571041 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr06I17 CN120968 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04K15 CN120291 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr33I12 CN109229 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26K15 CN104583 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20L15 CN103049 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas107m24 AL969724 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA022o14 BX703222 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9012561 EL858124 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9012030 EL857205 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011747 EL856340 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8907558 EL801189 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8874826 EL766221 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8926436 EL673294 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8869818 EL711018 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867376 EL706125 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867279 EL705773 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8864728 EL702042 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8932799 EL639416 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xtbs08C18 CN093495 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs06C15 CN092003 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs32F03 CN089980 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26B18 CN086144 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs23F19 CN084060 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22C11 CN082989 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19C18 CN081303 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18A07 CN080432 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs17H11 CN080157 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs12H19 CN076904 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst24c11 DC139852 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst25c11 DC140112 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT1193 CX360248 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593864 CX330619 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7850133 DT388301 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7593640 DR890682 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7804477 DR839824 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7736178 DN022842 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720794 CX995693 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716084 CX976701 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7558377 CX497407 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr33I12 CN109228 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26K15 CN104582 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20L15 CN103048 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas107m24 BX755386 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA022o14 BX703223 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xl228e12 DC102150 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk126m03ex DC044195 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk138g20ex DC047968 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk101p17ex DC036264 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk54m02ex DC033975 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk54j18ex DC033926 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk151c18ex DC052090 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7b05ex DC060985 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk77k15ex DC060210 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7975709 DR719971 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL461j05ex BP690457 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL421c20ex BP676183 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998A207826 BX848054 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGp998K1214206 BX846097 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL194e19 BJ620707 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5