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Summary Expression Phenotypes Gene Literature (9) GO Terms (45) Nucleotides (188) Proteins (81) Interactants (322) Wiki
XB-GENEPAGE-1008907

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chd3 - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (23)
Models - mRNA (39)
mRNAs (6)
ESTs (44)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002940828 XM_002940828.5 chromodomain-helicase-DNA-binding protein 3 isoform X1 7036 bp XP_002940874 X. tropicalis
XM_031899553 XM_031899553.1 XP_031755413.1 chromodomain-helicase-DNA-binding protein 3 isoform X2 7032 bp XP_031755413 X. tropicalis
XM_031899554 XM_031899554.1 XP_031755414.1 chromodomain-helicase-DNA-binding protein 3 isoform X3 7023 bp XP_031755414 X. tropicalis
XM_031899555 XM_031899555.1 XP_031755415.1 chromodomain-helicase-DNA-binding protein 3 isoform X4 7019 bp XP_031755415 X. tropicalis
XM_031899556 XM_031899556.1 XP_031755416.1 chromodomain-helicase-DNA-binding protein 3 isoform X5 6873 bp XP_031755416 X. tropicalis

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g000447 X. tropicalis
ENSEMBL 10.0 chd3 X. tropicalis
Xenbase 9.1 gene1852 X. tropicalis
ENSEMBL 9.1 chd3 X. tropicalis
JGI 7.1 Xetro.K05622 X. tropicalis
ENSEMBL 4.1 ENSXETG00000012991 X. tropicalis
JGI 4.1 e_gw1.675.234.1 X. tropicalis
JGI 4.1 e_gw1.675.73.1 X. tropicalis
JGI 4.1 gw1.675.113.1 X. tropicalis
JGI 4.1 gw1.675.233.1 X. tropicalis
JGI 4.1 gw1.675.234.1 X. tropicalis
JGI 4.1 gw1.675.73.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750233 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750234 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6750005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000026 X. tropicalis
JGI 4.1 e_gw1.675.233.1 X. tropicalis
JGI 4.1 e_gw1.675.113.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6750046 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750025 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000072474 X. tropicalis
NCBI 10.0 mRNA002379 X. tropicalis
ENSEMBL 10.0 ENSXETT00000028484 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084325 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082824 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075569 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072474 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068498 X. tropicalis
ENSEMBL 9.1 ENSXETT00000028484 X. tropicalis
Xenbase 9.1 rna6045 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090103 X. tropicalis
JGI 7.1 Xetro.K05622.4 X. tropicalis
JGI 7.1 Xetro.K05622.1 X. tropicalis
JGI 7.1 Xetro.K05622.2 X. tropicalis
JGI 7.1 Xetro.K05622.3 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028477 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028475 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028474 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006381 X. tropicalis
JGI 4.1 e_gw1.675.73.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6750005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6750046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750233 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750234 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000026 X. tropicalis
JGI 4.1 gw1.675.113.1 X. tropicalis
JGI 4.1 gw1.675.233.1 X. tropicalis
JGI 4.1 gw1.675.234.1 X. tropicalis
JGI 4.1 gw1.675.73.1 X. tropicalis
JGI 4.1 e_gw1.675.234.1 X. tropicalis
JGI 4.1 e_gw1.675.233.1 X. tropicalis
JGI 4.1 e_gw1.675.113.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028484 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028481 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028479 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:8923921 BC169169 X. tropicalis NICHD_XGC_tropThy1 thymus frog
XM_002940828 X. tropicalis
XM_031899553 X. tropicalis
XM_031899554 X. tropicalis
XM_031899555 X. tropicalis
XM_031899556 X. tropicalis

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7645274 CX802157 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653235 CX821429 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7621907 CX342667 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7672606 CX881889 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7645060 CX801986 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7665049 CX850135 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7649468 CX809450 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7719178 CX982433 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7643881 CX799737 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8952449 EG654564 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st74m21 DC185163 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38l21 DC176369 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35l21 DC173513 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6995593 CF239249 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8923921 EL669016 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs34M07 CN090876 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8932069 EL667237 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7661933 CX843581 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8904173 EL794900 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7649301 CX809296 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7660604 CX841222 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646570 CX804873 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7659254 CX839034 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7634424 CX338020 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7657159 CX828499 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
rst35l21 DC143273 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs34M07 CN090875 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7621907 CX342666 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634424 CX338019 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7649468 CX809449 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646570 CX804872 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645274 CX802156 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645060 CX801985 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643881 CX799736 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661933 CX843580 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660604 CX841221 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659254 CX839033 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657159 CX828498 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653235 CX821428 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7672606 CX881888 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665049 CX850134 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7719178 CX982432 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8923921 EL669015 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8932069 EL667236 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog