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Summary Expression Phenotypes Gene Literature (0) GO Terms (5) Nucleotides (125) Proteins (27) Interactants (172) Wiki
XB-GENEPAGE-1008961

All X.tropicalis X.laevis.L X.laevis.S

Nucleotide sequences for trub1 - All

Models - Gene (24)
Models - mRNA (24)
Unigene Clusters (2)
Gurdon EST Clusters (1)
mRNAs (3)
ESTs (46)

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g013860 X.tropicalis
Xenbase 9.2 gene19259 X.laevis.L
Xenbase 9.1 gene7315 X.tropicalis
JGI 9.1 Xelaev18034257m.g X.laevis.L
JGI 7.1 Xetro.G00041 X.tropicalis
JGI 6.0 XeXenL6RMv10049786m.g X.laevis.L
ENSEMBL 4.1 ENSXETG00000023828 X.tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7050008 X.tropicalis
JGI 4.1 e_gw1.705.32.1 X.tropicalis
JGI 4.1 e_gw1.705.58.1 X.tropicalis
JGI 4.1 e_gw1.705.66.1 X.tropicalis
JGI 4.1 gw1.705.32.1 X.tropicalis
JGI 4.1 gw1.705.58.1 X.tropicalis
JGI 4.1 gw1.705.66.1 X.tropicalis
JGI 4.1 estExt_FilteredModels1.C_7050006 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050032 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050058 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050066 X.tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_7050001 X.tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7050009 X.tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7050001 X.tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_705000001 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_705000008 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_705000009 X.tropicalis

Models - mRNA (24)

Source Version Model Species
NCBI 10.0 mRNA068538 X.tropicalis
Xenbase 9.2 rna56260 X.laevis.L
JGI 9.1 Xelaev18034257m X.laevis.L
Xenbase 9.1 rna23651 X.tropicalis
JGI 7.1 Xetro.G00041.1 X.tropicalis
JGI 6.0 XeXenL6RMv10049786m X.laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_7050008 X.tropicalis
ENSEMBL 4.1 ENSXETT00000051364 X.tropicalis
JGI 4.1 e_gw1.705.32.1 X.tropicalis
JGI 4.1 e_gw1.705.58.1 X.tropicalis
JGI 4.1 e_gw1.705.66.1 X.tropicalis
JGI 4.1 gw1.705.32.1 X.tropicalis
JGI 4.1 gw1.705.58.1 X.tropicalis
JGI 4.1 gw1.705.66.1 X.tropicalis
JGI 4.1 estExt_FilteredModels1.C_7050006 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050032 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050058 X.tropicalis
JGI 4.1 estExt_Genewise1.C_7050066 X.tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_7050001 X.tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7050009 X.tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7050001 X.tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_705000001 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_705000008 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_705000009 X.tropicalis

Gurdon EST Clusters (1)

ID Species
1012073444 X.tropicalis

mRNAs (3)

Clone Accession Species Library Anatomy Stage
TTbA069n10 CU025119 X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XM_002941057 X.tropicalis
XM_041570142 X.laevis.L

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
st70n17 DC184140 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st45j12 DC178013 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39f18 DC176529 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st19o12 DC168522 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st106l02 DC192912 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7540505 CX461903 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565606 CX482423 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560693 CX463417 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566743 CX507050 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526255 CX443270 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA023g12 CR441856 5' X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069n10 CR439847 5' X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011l19 CR410244 5' X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04N04 CN120551 5' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04N04 CN118014 5' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr35M02 CN110458 5' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr15M22 CN098953 5' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu090n18 AL800837 5' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6994096 CF237859 5' X.tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6994478 CF237454 5' X.tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6982201 CF225770 5' X.tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6980637 CF148103 5' X.tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5308095 BQ390296 5' X.tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
rst45j12 DC147728 3' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst19o12 DC138440 3' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7566743 CX507049 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565606 CX482422 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560693 CX463416 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540505 CX461902 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA069n10 CR439848 3' X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011l19 CR410245 3' X.tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04N04 CN118013 3' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr35M02 CN110457 3' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr15M22 CN098952 3' X.tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:6982201 CF225771 3' X.tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5308095 BQ390295 3' X.tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl282b13 DC118125 5' X.laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk150c07ex DC051769 5' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8825418 EG573007 5' X.laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:7979909 DR729190 5' X.laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL517c04ex BP706199 5' X.laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL073d08 BJ061513 5' X.laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549810 BG578472 5' X.laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
rxl282b13 DC083409 3' X.laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk150c07ex DC018420 3' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL073d08 BJ079699 3' X.laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25