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Summary Expression Phenotypes Gene Literature (11) GO Terms (111) Nucleotides (243) Proteins (81) Interactants (1116) Wiki
XB-GENEPAGE-1013461

Show:     All X. tropicalis X. laevis

Nucleotide sequences for htt - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (27)
Models - mRNA (38)
mRNAs (6)
ESTs (50)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_012955737 XM_012955737.3 huntingtin isoform X2 12706 bp XP_012811191 X. tropicalis
XM_012955738 XM_012955738.3 huntingtin isoform X4 12658 bp XP_012811192 X. tropicalis
XM_031895313 XM_031895313.1 XP_031751173.1 huntingtin isoform X1 12745 bp XP_031751173 X. tropicalis
XM_031895314 XM_031895314.1 XP_031751174.1 huntingtin isoform X3 12697 bp XP_031751174 X. tropicalis

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g014561 X. tropicalis
ENSEMBL 10.0 htt X. tropicalis
Xenbase 9.1 gene2967 X. tropicalis
ENSEMBL 9.1 htt X. tropicalis
JGI 7.1 Xetro.A03228 X. tropicalis
ENSEMBL 4.1 ENSXETG00000014723 X. tropicalis
JGI 4.1 e_gw1.457.54.1 X. tropicalis
JGI 4.1 gw1.457.26.1 X. tropicalis
JGI 4.1 gw1.457.54.1 X. tropicalis
JGI 4.1 gw1.457.31.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4570007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570054 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4570004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4570003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_457000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_457000003 X. tropicalis
JGI 4.1 e_gw1.457.31.1 X. tropicalis
JGI 4.1 e_gw1.457.26.1 X. tropicalis
JGI 4.1 C_scaffold_457000004 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000032280 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062928 X. tropicalis
NCBI 10.0 mRNA071991 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097332 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103469 X. tropicalis
ENSEMBL 9.1 ENSXETT00000032280 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071050 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090763 X. tropicalis
Xenbase 9.1 rna9715 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062928 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097332 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100755 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101349 X. tropicalis
JGI 7.1 Xetro.A03228.1 X. tropicalis
JGI 7.1 Xetro.A03228.2 X. tropicalis
JGI 7.1 Xetro.A03228.3 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_457000003 X. tropicalis
JGI 4.1 gw1.457.26.1 X. tropicalis
JGI 4.1 gw1.457.31.1 X. tropicalis
JGI 4.1 gw1.457.54.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570009 X. tropicalis
JGI 4.1 e_gw1.457.26.1 X. tropicalis
JGI 4.1 e_gw1.457.31.1 X. tropicalis
JGI 4.1 e_gw1.457.54.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000032280 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4570004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4570008 X. tropicalis
JGI 4.1 C_scaffold_457000004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4570003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4570007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4570054 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_457000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_457000007 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:6979091 BC080340 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_001007903 X. tropicalis
XM_012955737 X. tropicalis
XM_012955738 X. tropicalis
XM_031895313 X. tropicalis
XM_031895314 X. tropicalis

ESTs (50)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7648971 CX808327 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:6979091 CF149838 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6983993 CF152209 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7605873 CX413086 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7561259 CX464662 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas116c06 AL967254 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7647361 CX805736 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646260 CX804036 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645907 CX802896 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644751 CX800813 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644109 CX799657 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640832 CX794421 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7662820 CX845531 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656460 CX827920 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652984 CX820981 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7695277 CX924122 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694665 CX922774 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691579 CX916965 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691169 CX916059 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7750641 DN049622 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7757076 DR875022 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8942789 EG655952 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8920955 EL835136 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916615 EL829750 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915371 EL827598 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9013971 EL859814 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7651522 CX813389 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650672 CX811508 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648798 CX808781 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7561259 CX464661 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8915371 EL827599 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7651522 CX813388 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7656460 CX827919 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650672 CX811507 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7750641 DN049621 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7648798 CX808780 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8916615 EL829751 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7695277 CX924121 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7647361 CX805735 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7757076 DR875021 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7646260 CX804035 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7694665 CX922773 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:9013971 EL859815 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7644751 CX800812 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7691579 CX916964 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7644109 CX799656 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
rst60a12 DC151156 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7640832 CX794420 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7691169 CX916058 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662820 CX845530 3' X. tropicalis NIH_XGC_tropBrn3 brain frog