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Summary Expression Phenotypes Gene Literature (1) GO Terms (11) Nucleotides (206) Proteins (93) Interactants (22) Wiki
XB-GENEPAGE-1014145

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ppfibp1 - All

RefSeq mRNAs(18)
Models - Gene (31)
Models - mRNA (44)
mRNAs (21)
ESTs (51)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
XM_031898457 XM_031898457.1 XP_031754317.1 liprin-beta-1 isoform X1 3378 bp XP_031754317 X. tropicalis
XM_031898458 XM_031898458.1 XP_031754318.1 liprin-beta-1 isoform X1 3357 bp XP_031754318 X. tropicalis
XM_031898459 XM_031898459.1 XP_031754319.1 liprin-beta-1 isoform X2 3375 bp XP_031754319 X. tropicalis
XM_031898460 XM_031898460.1 XP_031754320.1 liprin-beta-1 isoform X3 3345 bp XP_031754320 X. tropicalis
XM_031898461 XM_031898461.1 XP_031754321.1 liprin-beta-1 isoform X4 3284 bp XP_031754321 X. tropicalis
XM_031898462 XM_031898462.1 XP_031754322.1 liprin-beta-1 isoform X5 3275 bp XP_031754322 X. tropicalis
XM_031898463 XM_031898463.1 XP_031754323.1 liprin-beta-1 isoform X6 3182 bp XP_031754323 X. tropicalis
XM_031898464 XM_031898464.1 XP_031754324.1 liprin-beta-1 isoform X7 3146 bp XP_031754324 X. tropicalis
XM_031898465 XM_031898465.1 XP_031754325.1 liprin-beta-1 isoform X8 3242 bp XP_031754325 X. tropicalis
XM_031898466 XM_031898466.1 XP_031754326.1 liprin-beta-1 isoform X9 3148 bp XP_031754326 X. tropicalis
NM_001089047 NM_001089047.1 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog 4518 bp NP_001082516 X. laevis.S
XM_018254157 XM_018254157.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X1 4831 bp XP_018109646 X. laevis.S
XM_018254158 XM_018254158.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X2 4798 bp XP_018109647 X. laevis.S
XM_018254159 XM_018254159.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X3 4738 bp XP_018109648 X. laevis.S
XM_018254160 XM_018254160.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X4 4729 bp XP_018109649 X. laevis.S
XM_018254161 XM_018254161.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X5 4636 bp XP_018109650 X. laevis.S
XM_018254162 XM_018254162.2 PTPRF interacting protein, binding protein 1 (liprin beta 1) S homeolog isoform X6 4696 bp XP_018109651 X. laevis.S
NM_001093649 NM_001093649.1 NP_001087118.1 PTPRF interacting protein, binding protein 2 (liprin beta 2) L homeolog 4779 bp NP_001087118 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g14962 X. laevis.S
NCBI 10.0 XBXT10g016895 X. tropicalis
NCBI 10.1 XBXL10_1g11378 X. laevis.L
ENSEMBL 10.0 ppfibp1 X. tropicalis
Xenbase 9.2 gene10556 X. laevis.S
Xenbase 9.2 gene45717 X. laevis.L
Xenbase 9.1 gene16332 X. tropicalis
ENSEMBL 9.1 ppfibp1 X. tropicalis
JGI 8.0 Xetrov14051414m.g X. tropicalis
JGI 7.2 Xelaev16069320m.g X. laevis.S
JGI 7.2 Xelaev16052458m.g X. laevis.L
JGI 7.1 Xetro.K03072 X. tropicalis
JGI 6.0 XeXenL6RMv10050703m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016522 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060044 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12060007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12060004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1206000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1206000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12060007 X. tropicalis
JGI 4.1 gw1.1206.45.1 X. tropicalis
JGI 4.1 gw1.1206.44.1 X. tropicalis
JGI 4.1 gw1.1206.43.1 X. tropicalis
JGI 4.1 gw1.1206.2.1 X. tropicalis
JGI 4.1 e_gw1.1206.45.1 X. tropicalis
JGI 4.1 e_gw1.1206.44.1 X. tropicalis
JGI 4.1 e_gw1.1206.43.1 X. tropicalis
JGI 4.1 e_gw1.1206.2.1 X. tropicalis
JGI 4.1 C_scaffold_1206000004 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA27846 X. laevis.S
NCBI 10.1 XBmRNA21380 X. laevis.L
ENSEMBL 10.0 ENSXETT00000104934 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102727 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088008 X. tropicalis
NCBI 10.0 mRNA083684 X. tropicalis
ENSEMBL 10.0 ENSXETT00000036020 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106439 X. tropicalis
Xenbase 9.2 rna90220 X. laevis.L
Xenbase 9.2 rna30674 X. laevis.S
ENSEMBL 9.1 ENSXETT00000090731 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088008 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083281 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074760 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073146 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060125 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036020 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104934 X. tropicalis
Xenbase 9.1 rna35905 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102727 X. tropicalis
JGI 8.0 Xetrov14051414m X. tropicalis
JGI 7.2 Xelaev16052458m X. laevis.L
JGI 7.2 Xelaev16069320m X. laevis.S
JGI 7.1 Xetro.K03072.1 X. tropicalis
JGI 6.0 XeXenL6RMv10050703m X. laevis.S
ENSEMBL 4.1 ENSXETT00000036020 X. tropicalis
JGI 4.1 gw1.1206.45.1 X. tropicalis
JGI 4.1 gw1.1206.44.1 X. tropicalis
JGI 4.1 gw1.1206.43.1 X. tropicalis
JGI 4.1 gw1.1206.2.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1206000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1206000007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12060002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12060007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12060004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12060007 X. tropicalis
JGI 4.1 e_gw1.1206.45.1 X. tropicalis
JGI 4.1 e_gw1.1206.44.1 X. tropicalis
JGI 4.1 e_gw1.1206.43.1 X. tropicalis
JGI 4.1 e_gw1.1206.2.1 X. tropicalis
JGI 4.1 C_scaffold_1206000004 X. tropicalis

mRNAs from cDNA libraries (21)

Clone Accession Species Library Anatomy Stage
XM_031898457 X. tropicalis
XM_031898458 X. tropicalis
XM_031898459 X. tropicalis
XM_031898460 X. tropicalis
XM_031898461 X. tropicalis
XM_031898462 X. tropicalis
XM_031898463 X. tropicalis
XM_031898464 X. tropicalis
XM_031898465 X. tropicalis
XM_031898466 X. tropicalis
IMAGE:5543281 BC045033 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4175177 BC077745 X. laevis.S
NM_001089047 X. laevis.S
XM_018254157 X. laevis.S
XM_018254158 X. laevis.S
XM_018254159 X. laevis.S
XM_018254160 X. laevis.S
XM_018254161 X. laevis.S
XM_018254162 X. laevis.S
IMAGE:4963336 BC078009 X. laevis.L
NM_001093649 X. laevis.L

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas051n15 AL675843 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7648008 CX806936 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644827 CX801014 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7848340 DT533267 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:9010366 EL854906 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7641400 CX795050 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8904030 EL795184 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7690854 CX915847 5' X. tropicalis NIH_XGC_tropTe4 testis frog
XZT4238 CX400116 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9010366 EL854907 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas051n15 BX746461 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XZT4238 CX400115 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7641400 CX795049 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644827 CX801013 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
rst26o08 DC140612 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7848340 DT533266 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8904030 EL795185 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7690854 CX915846 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:3550109 BG577950 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3437075 BF614380 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4785303 BI442571 5' X. laevis.S Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGp998A208089 BX843867 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:6862615 CA986356 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864335 CA987646 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL145p22 BJ094606 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172b22 BJ615455 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197e20 BJ621414 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL215o11 BJ626764 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl276p13 DC116706 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl277p13 DC116973 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl282k22 DC118295 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4084110 BG892829 5' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL036b05 BJ036342 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7981951 DR724531 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:5543281 BQ737127 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998P0212243 BX849961 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL062p09 BJ059558 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054a04 BJ069613 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl282k22 DC083582 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl277p13 DC082017 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl276p13 DC081743 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL214d13 BJ642630 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197e20 BJ638130 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172b22 BJ632087 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4785303 BI443566 3' X. laevis.S Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:3302299 BF072262 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3437075 BF232459 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL062p09 BJ078067 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054a04 BJ086743 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7981951 DR724472 3' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL036b05 BJ051567 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15