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XB-GENEPAGE-1014286
Nucleotide sequences for ttc39a - All
RefSeq mRNAs(7) |
Models - Gene (26) |
Models - mRNA (33) |
mRNAs (8) |
ESTs (6) |
RefSeq mRNAs (7)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001016774
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NM_001016774.2 | tetratricopeptide repeat protein 39A | 2238 bp | NP_001016774 | X. tropicalis |
XM_018260883
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XM_018260883.2 | tetratricopeptide repeat protein 39A isoform X1 | 4798 bp | XP_018116372 | X. laevis.S |
XM_018260884
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XM_018260884.2 | tetratricopeptide repeat protein 39A isoform X2 | 4790 bp | XP_018116373 | X. laevis.S |
XM_018258410
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XM_018258410.2 | tetratricopeptide repeat protein 39A isoform X1 | 3482 bp | XP_018113899 | X. laevis.L |
XM_018258411
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XM_018258411.2 | tetratricopeptide repeat protein 39A isoform X2 | 3451 bp | XP_018113900 | X. laevis.L |
XM_018258412
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XM_018258412.2 | tetratricopeptide repeat protein 39A isoform X3 | 3427 bp | XP_018113901 | X. laevis.L |
XM_041590456
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XM_041590456.1 | XP_041446390.1 tetratricopeptide repeat protein 39A isoform X4 | 3307 bp | XP_041446390 | X. laevis.L |
Models - Gene (26)
Source | Version | Model | Species |
NCBI | 10.1 |
XBXL10_1g21702
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X. laevis.S |
NCBI | 10.1 |
XBXL10_1g19243
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X. laevis.L |
NCBI | 10.0 |
XBXT10g013413
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X. tropicalis |
ENSEMBL | 10.0 |
ttc39a
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X. tropicalis |
Xenbase | 9.2 |
gene20269
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X. laevis.S |
Xenbase | 9.2 |
gene12715
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X. laevis.L |
JGI | 9.1 |
Xelaev18025267m.g
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X. laevis.S |
JGI | 9.1 |
Xelaev18023166m.g
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X. laevis.L |
Xenbase | 9.1 |
gene7229
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X. tropicalis |
ENSEMBL | 9.1 |
ttc39a
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X. tropicalis |
JGI | 7.1 |
Xetro.D01973
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10008644m.g
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X. laevis.S |
ENSEMBL | 4.1 |
ENSXETG00000002835
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_1000121
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_1000036
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10424
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10114
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10008
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X. tropicalis |
JGI | 4.1 |
estExt_FilteredModels1.C_10061
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X. tropicalis |
JGI | 4.1 |
gw1.1.114.1
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X. tropicalis |
JGI | 4.1 |
gw1.1.8.1
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X. tropicalis |
JGI | 4.1 |
gw1.1.426.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.8.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.426.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.114.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_Sanger_cdna.C_scaffold_1000017
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X. tropicalis |
mRNAs based on gene models(33)
Source | Version | Model | Species |
NCBI | 10.1 |
XBmRNA35555
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X. laevis.L |
NCBI | 10.1 |
XBmRNA40228
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X. laevis.S |
ENSEMBL | 10.0 |
ENSXETT00000006193
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X. tropicalis |
NCBI | 10.0 |
mRNA066436
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X. tropicalis |
Xenbase | 9.2 |
rna36936
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X. laevis.L |
Xenbase | 9.2 |
rna59170
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X. laevis.S |
Xenbase | 9.1 |
rna23361
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X. tropicalis |
JGI | 9.1 |
Xelaev18023166m
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X. laevis.L |
JGI | 9.1 |
Xelaev18025267m
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X. laevis.S |
ENSEMBL | 9.1 |
ENSXETT00000089482
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000082608
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000071863
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000071107
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000070158
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000060482
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000006193
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X. tropicalis |
JGI | 7.1 |
Xetro.D01973.1
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X. tropicalis |
JGI | 7.1 |
Xetro.D01973.2
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10008644m
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X. laevis.S |
ENSEMBL | 4.1 |
ENSXETT00000006193
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X. tropicalis |
JGI | 4.1 |
gw1.1.8.1
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X. tropicalis |
JGI | 4.1 |
gw1.1.426.1
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X. tropicalis |
JGI | 4.1 |
gw1.1.114.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_Sanger_cdna.C_scaffold_1000017
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_1000036
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_1000121
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10424
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10114
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_10008
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.8.1
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X. tropicalis |
JGI | 4.1 |
estExt_FilteredModels1.C_10061
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.426.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1.114.1
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X. tropicalis |
mRNAs from cDNA libraries (8)
Clone | Accession | Species | Library | Anatomy | Stage |
TGas136f11 |
CR855725
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X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
NM_001016774
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X. tropicalis | ||||
XM_018260883
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X. laevis.S | ||||
XM_018260884
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X. laevis.S | ||||
XM_018258410
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X. laevis.L | ||||
XM_018258411
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X. laevis.L | ||||
XM_018258412
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X. laevis.L | ||||
XM_041590456
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X. laevis.L |
ESTs (6)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
TGas136f11 |
AL967745
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5' | X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
TNeu047a14 |
AL659488
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5' | X. tropicalis | XGC-neurula | whole organism | NF stage 13 to NF stage 21 |
TTbA044h09 |
CR427006
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5' | X. tropicalis | XGC-tailbud | whole organism | NF stage 28 to NF stage 29 and 30 |
TGas136f11 |
BX761431
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3' | X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
IMAGE:3473147 |
BI348398
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5' | X. laevis.S | Wellcome CRC pRN3 oocyte | oocyte | unspecified stage |
PBX0085C01 |
AW639631
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5' | X. laevis.S | Blackshear/Soares normalized Xenopus egg library | egg | unfertilized egg stage |