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Summary Expression Phenotypes Gene Literature (3) GO Terms (37) Nucleotides (130) Proteins (61) Interactants (35) Wiki
XB-GENEPAGE-1014799

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sema3c - All

RefSeq mRNAs(6)
Models - Gene (26)
Models - mRNA (41)
mRNAs (9)
ESTs (31)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002933086 XM_002933086.5 semaphorin-3C isoform X1 4966 bp XP_002933132 X. tropicalis
XM_004913029 XM_004913029.4 semaphorin-3C isoform X3 2602 bp XP_004913086 X. tropicalis
XM_031899027 XM_031899027.1 XP_031754887.1 semaphorin-3C isoform X2 4518 bp XP_031754887 X. tropicalis
NM_001094933 NM_001094933.1 semaphorin 3C S homeolog precursor 3046 bp NP_001088402 X. laevis.S
XM_018252700 XM_018252700.2 semaphorin-3C 2965 bp XP_018108189 X. laevis.L
XM_041586545 XM_041586545.1 XP_041442479.1 semaphorin-3C 2842 bp XP_041442479 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g16074 X. laevis.S
NCBI 10.1 XBXL10_1g12808 X. laevis.L
NCBI 10.0 XBXT10g009285 X. tropicalis
ENSEMBL 10.0 sema3c X. tropicalis
Xenbase 9.2 gene10271 X. laevis.S
Xenbase 9.2 gene1987 X. laevis.L
JGI 9.1 Xelaev18020956m.g X. laevis.S
JGI 9.1 Xelaev18017801m.g X. laevis.L
Xenbase 9.1 gene5138 X. tropicalis
ENSEMBL 9.1 sema3c X. tropicalis
JGI 8.0 Xetrov14014145m.g X. tropicalis
JGI 7.2 Xelaev16043969m.g X. laevis.S
JGI 7.1 Xetro.C01981 X. tropicalis
JGI 6.0 XeXenL6RMv10006534m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000007874 X. tropicalis
JGI 4.1 gw1.45.204.1 X. tropicalis
JGI 4.1 gw1.45.168.1 X. tropicalis
JGI 4.1 gw1.45.167.1 X. tropicalis
JGI 4.1 e_gw1.45.204.1 X. tropicalis
JGI 4.1 e_gw1.45.168.1 X. tropicalis
JGI 4.1 e_gw1.45.167.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_45000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_45000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_45000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_45000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_45000010 X. tropicalis

mRNAs based on gene models(41)

Source Version Model Species
NCBI 10.1 XBmRNA30103 X. laevis.S
NCBI 10.1 XBmRNA24149 X. laevis.L
ENSEMBL 10.0 ENSXETT00000089955 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093740 X. tropicalis
ENSEMBL 10.0 ENSXETT00000017222 X. tropicalis
NCBI 10.0 mRNA045883 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077011 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082316 X. tropicalis
Xenbase 9.2 rna29866 X. laevis.S
Xenbase 9.2 rna5786 X. laevis.L
ENSEMBL 9.1 ENSXETT00000089955 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093740 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104862 X. tropicalis
Xenbase 9.1 rna16721 X. tropicalis
JGI 9.1 Xelaev18017801m X. laevis.L
ENSEMBL 9.1 ENSXETT00000017222 X. tropicalis
JGI 9.1 Xelaev18020956m X. laevis.S
ENSEMBL 9.1 ENSXETT00000017224 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072335 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077011 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078696 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081961 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082316 X. tropicalis
JGI 8.0 Xetrov14014145m X. tropicalis
JGI 7.2 Xelaev16043969m X. laevis.S
JGI 7.1 Xetro.C01981.2 X. tropicalis
JGI 7.1 Xetro.C01981.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006534m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_45000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_45000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_45000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_45000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_45000010 X. tropicalis
JGI 4.1 e_gw1.45.167.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017224 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017222 X. tropicalis
JGI 4.1 e_gw1.45.204.1 X. tropicalis
JGI 4.1 gw1.45.167.1 X. tropicalis
JGI 4.1 e_gw1.45.168.1 X. tropicalis
JGI 4.1 gw1.45.168.1 X. tropicalis
JGI 4.1 gw1.45.204.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:6999017 BC096502 X. tropicalis NICHD_XGC_Swb1 whole organism frog
TNeu045f12 CT025180 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002933086 X. tropicalis
XM_004913029 X. tropicalis
XM_031899027 X. tropicalis
IMAGE:5157372 BC084294 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094933 X. laevis.S
XM_018252700 X. laevis.L
XM_041586545 X. laevis.L

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6999017 CF344835 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7661239 CX842371 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7644426 CX800547 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8916082 EL828959 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7645637 CX802349 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas046c03 AL653328 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7646004 CX803254 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7694825 CX922538 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7548456 CX490691 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7690887 CX915393 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7552026 CX494588 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu045f12 AL659439 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7585921 CX318960 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7792865 CX813952 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647852 CX806844 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8916082 EL828960 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:4463061 BG886306 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7548456 CX490690 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552026 CX494587 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7644426 CX800546 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645637 CX802348 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646004 CX803253 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647852 CX806843 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7690887 CX915392 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGp998E088394 BX854000 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:5157372 CA793579 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6935943 CD811246 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935943 CB984239 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3437169 BF614389 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3437167 BF614388 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3437167 BF232471 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage