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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (270) Proteins (89) Interactants (11) Wiki
XB-GENEPAGE-1016420

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for depdc1 - All

Models - Gene (34)
Models - mRNA (50)
mRNAs (17)
ESTs (101)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g011578 X. tropicalis
NCBI 10.1 XBXL10_1g21545 X. laevis.S
NCBI 10.1 XBXL10_1g19043 X. laevis.L
ENSEMBL 10.0 depdc1 X. tropicalis
JGI 9.1 Xelaev18025097m.g X. laevis.S
JGI 9.1 Xelaev18022957m.g X. laevis.L
Xenbase 9.1 gene3843 X. tropicalis
Xenbase 9.2 gene50040 X. laevis.S
Xenbase 9.2 gene42782 X. laevis.L
ENSEMBL 9.1 depdc1 X. tropicalis
JGI 7.1 Xetro.D01784 X. tropicalis
JGI 7.2 Xelaev16016017m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036208m.g X. laevis.S
JGI 6.0 XeXenL6RMv10025129m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012376 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_431000002 X. tropicalis
JGI 4.1 e_gw1.431.34.1 X. tropicalis
JGI 4.1 e_gw1.431.46.1 X. tropicalis
JGI 4.1 e_gw1.431.64.1 X. tropicalis
JGI 4.1 gw1.431.34.1 X. tropicalis
JGI 4.1 gw1.431.46.1 X. tropicalis
JGI 4.1 gw1.431.64.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4310004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310034 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4310004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_431000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_431000004 X. tropicalis

Models - mRNA (50)

Source Version Model Species
NCBI 10.0 mRNA057509 X. tropicalis
NCBI 10.1 XBmRNA35140 X. laevis.L
NCBI 10.1 XBmRNA39917 X. laevis.S
ENSEMBL 10.0 ENSXETT00000027066 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068223 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091334 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123258 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091607 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073829 X. tropicalis
JGI 9.1 Xelaev18022957m X. laevis.L
JGI 9.1 Xelaev18025097m X. laevis.S
Xenbase 9.1 rna12536 X. tropicalis
Xenbase 9.2 rna85832 X. laevis.L
Xenbase 9.2 rna96312 X. laevis.S
ENSEMBL 9.1 ENSXETT00000091334 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068223 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027066 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073829 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091607 X. tropicalis
JGI 7.1 Xetro.D01784.2 X. tropicalis
JGI 7.1 Xetro.D01784.3 X. tropicalis
JGI 7.1 Xetro.D01784.6 X. tropicalis
JGI 7.1 Xetro.D01784.7 X. tropicalis
JGI 7.1 Xetro.D01784.4 X. tropicalis
JGI 7.1 Xetro.D01784.8 X. tropicalis
JGI 7.1 Xetro.D01784.1 X. tropicalis
JGI 7.1 Xetro.D01784.5 X. tropicalis
JGI 7.2 Xelaev16016017m X. laevis.L
JGI 6.0 XeXenL6RMv10025129m X. laevis.L
JGI 6.0 XeXenL6RMv10036208m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_431000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027066 X. tropicalis
JGI 4.1 e_gw1.431.34.1 X. tropicalis
JGI 4.1 e_gw1.431.46.1 X. tropicalis
JGI 4.1 e_gw1.431.64.1 X. tropicalis
JGI 4.1 gw1.431.34.1 X. tropicalis
JGI 4.1 gw1.431.46.1 X. tropicalis
JGI 4.1 gw1.431.64.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4310004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310034 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4310004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_431000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_431000004 X. tropicalis

mRNAs (17)

Clone Accession Species Library Anatomy Stage
NM_001016814 X. tropicalis
TEgg039n22 CR855561 X. tropicalis
IMAGE:7028784 BC081375 X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7565323 BC160463 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_012961139 X. tropicalis
XM_012961138 X. tropicalis
XM_012961137 X. tropicalis
XM_012961136 X. tropicalis
IMAGE:7209786 BC108508 X. laevis.S
IMAGE:5074571 BC072317 X. laevis.L
IMAGE:6316344 BC068890 X. laevis.S
NM_001096358 X. laevis.S
NM_001091944 X. laevis.L
XM_018259763 X. laevis.S
XM_018259762 X. laevis.S
XM_018256679 X. laevis.L
XM_041589261 X. laevis.L

ESTs (101)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
st95p11 DC190341 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st113c18 DC194933 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st96p11 DC190581 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO12632 CX963714 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7579844 CX419259 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576482 CX432091 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576383 CX431736 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546446 CX499648 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544757 CX486898 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAN12155 CX928619 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7533010 CX434227 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565323 CX481489 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561056 CX464245 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567160 CX507928 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566841 CX507070 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7596611 DR891267 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7695732 CX925007 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7520294 CX480750 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519823 CX479871 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526537 CX443614 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071l24 CR426874 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr19I21 CN101333 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas126d09 AL972140 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109b16 AL970548 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107o09 AL965621 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142g24 AL962954 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128j11 AL959181 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135l20 AL958136 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas050i07 AL649678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027o21 AL655316 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas026m11 AL655206 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039f11 AL653836 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032l12 AL648895 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu090b02 AL800766 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104d05 AL796047 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107j14 AL790684 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079d19 AL776136 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas068i05 AL683671 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu043p15 AL660523 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017c04 AL645207 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013m13 AL636556 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7028784 CF786394 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas103f24 AL961038 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu062d21 AL673486 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO12632 CX963713 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN12155 CX928618 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7561056 CX464244 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7695732 CX925006 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7596611 DR891266 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7567160 CX507927 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566841 CX507069 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546446 CX499647 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544757 CX486897 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565323 CX481488 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520294 CX480749 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519823 CX479870 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533010 CX434226 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576482 CX432090 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576383 CX431735 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579844 CX419258 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071l24 CR426875 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr19I21 CN101332 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas135l20 BX758819 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128j11 BX758658 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126d09 BX758357 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142g24 BX757926 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas138n05 BX757488 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas113l06 BX756483 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107o09 BX755411 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103f24 BX754475 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas052m14 BX747833 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068i05 BX746978 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu107j14 BX692593 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu090b02 BX691673 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104d05 BX690691 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079d19 BX685937 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062d21 BX684949 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xlk60b12ex DC035656 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7983563 DR729072 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL493p08ex BP708245 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL423a04ex BP688967 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488m21ex BP699816 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL219c11 BJ627727 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL209b22 BJ624631 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL184o07 BJ618402 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL066l06 BJ060741 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6871002 CA983442 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4783644 BI349534 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402974 BG364058 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3743934 BF426999 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0038D03 AW635792 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0018E02 AW634177 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL493p08ex BP740186 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488m21ex BP732682 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL423a04ex BP714036 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL184o07 BJ634965 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL066l06 BJ078959 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4783644 BM191872 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402974 BG020803 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10