Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (467) GO Terms (27) Nucleotides (241) Proteins (41) Interactants (2118) Wiki
XB-GENEPAGE-1017497

All tropicalis laevis

Nucleotide sequences for myod1 - All

Models - Gene (23)
Models - mRNA (23)
Unigene Clusters (3)
Gurdon EST Clusters (3)
mRNAs (14)
ESTs (172)

Models - Gene (23)

Source Version Model Species
Xenbase 9.2 gene8594 laevis.S
Xenbase 9.2 gene16778 laevis.L
Xenbase 9.1 gene26475 tropicalis
JGI 9.1 Xelaev18024659m.g laevis.S
JGI 9.1 Xelaev18021662m.g laevis.L
JGI 7.2 Xelaev16079113m.g laevis.S
JGI 7.2 Xelaev16056543m.g laevis.L
JGI 7.1 Xetro.K04379 tropicalis
JGI 6.0 XeXenL6RMv10029230m.g laevis.S
JGI 6.0 XeXenL6RMv10047865m.g laevis.L
JGI 4.1 e_gw1.2758.3.1 tropicalis
ENSEMBL 4.1 ENSXETG00000001320 tropicalis
JGI 4.1 e_gw1.2758.1.1 tropicalis
JGI 4.1 e_gw1.2758.2.1 tropicalis
JGI 4.1 gw1.2758.1.1 tropicalis
JGI 4.1 gw1.2758.2.1 tropicalis
JGI 4.1 gw1.2758.3.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_27580001 tropicalis
JGI 4.1 estExt_Genewise1.C_27580001 tropicalis
JGI 4.1 estExt_Genewise1.C_27580002 tropicalis
JGI 4.1 estExt_Genewise1.C_27580003 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_27580001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2758000001 tropicalis

Models - mRNA (23)

Source Version Model Species
Xenbase 9.2 rna49032 laevis.L
Xenbase 9.2 rna25006 laevis.S
JGI 9.1 Xelaev18021662m laevis.L
JGI 9.1 Xelaev18024659m laevis.S
Xenbase 9.1 rna51936 tropicalis
JGI 7.2 Xelaev16056543m laevis.L
JGI 7.2 Xelaev16079113m laevis.S
JGI 7.1 Xetro.K04379.1 tropicalis
JGI 6.0 XeXenL6RMv10029230m laevis.S
JGI 6.0 XeXenL6RMv10047865m laevis.L
JGI 4.1 e_gw1.2758.3.1 tropicalis
ENSEMBL 4.1 ENSXETT00000002819 tropicalis
JGI 4.1 e_gw1.2758.1.1 tropicalis
JGI 4.1 e_gw1.2758.2.1 tropicalis
JGI 4.1 gw1.2758.1.1 tropicalis
JGI 4.1 gw1.2758.2.1 tropicalis
JGI 4.1 gw1.2758.3.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_27580001 tropicalis
JGI 4.1 estExt_Genewise1.C_27580001 tropicalis
JGI 4.1 estExt_Genewise1.C_27580002 tropicalis
JGI 4.1 estExt_Genewise1.C_27580003 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_27580001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2758000001 tropicalis

Gurdon EST Clusters (3)

ID Species
1012073415 tropicalis
1012768443 laevis.S
1012838434 laevis.L

mRNAs (14)

Clone Accession Species Library Anatomy Stage
TNeu080n16 CR760126 tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384107 BC061388 tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_203641 tropicalis
AJ579310 tropicalis
IMAGE:7978929 BC106319 laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:5571795 BC073672 laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4885255 BC041190 laevis.S NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
AGL_25D01 DQ096863 laevis.S
M31116 laevis.S
XmyoD2-24 X16106 laevis.S
M31118 laevis.L
NM_001085897 laevis.S
NM_001087823 laevis.L
M31117 laevis.S

ESTs (172)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886620 EL844293 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8907999 EL801593 5' tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8863109 EL706245 5' tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st67c14 DC183230 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st65c14 DC182715 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st63e19 DC182246 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st62g02 DC181998 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st9k22 DC175771 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st33l09 DC172961 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st95m21 DC190304 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st93b11 DC189653 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13d07 DC166546 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st12p16 DC166474 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st10n19 DC165853 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7576417 CX431645 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7615000 CX391503 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610307 CX376671 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7851922 DT391924 5' tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7555983 CX503535 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513842 CX743630 5' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512958 CX742255 5' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTbA054j04 CR425677 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7093436 CK655620 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7092532 CK654480 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
myod1-HAR8 AL795473 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114k22 AL787517 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu080n16 AL784846 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu080o16 AL784680 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065c07 AL783402 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071c20 AL780570 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
myod1-HAR15 AL677695 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas055f23 AL676347 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu028l09 AL646663 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
myod1-HAR10 AL645144 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
myod1-HAR9 AL642930 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
myod1-HAR5 AL638062 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6995456 CF239440 5' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6981301 CF222598 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988929 CF219897 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5384107 BQ396704 5' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8886620 EL844294 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8907999 EL801594 3' tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8863109 EL706244 3' tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst95m21 DC160304 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst93b11 DC159603 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst65c14 DC152474 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst63e19 DC151990 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst9k22 DC145471 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst62g02 DC151740 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst33l09 DC142699 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst13d07 DC136476 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst12p16 DC136411 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst10n19 DC135766 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7615000 CX391502 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7513842 CX743629 3' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512958 CX742254 3' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7576417 CX431644 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610307 CX376670 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA054j04 CR425678 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7092532 CN322994 3' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas055f23 BX747067 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu114k22 BX698471 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu080o16 BX695498 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu080n16 BX695482 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065c07 BX689596 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071c20 BX688042 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6981301 CF222597 3' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5384107 BQ396703 3' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xl337b06 DC134097 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl240b03 DC105735 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl269m22 DC114670 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl305c22 DC124606 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl243h22 DC106804 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl222k19 DC100412 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl242j04 DC106522 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl336b06 DC133833 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl309e07 DC125804 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk76c15ex DC059709 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk62d10ex DC054939 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk121m17ex DC042575 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk2n07ex DC053550 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk8l09ex DC062137 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk2d20ex DC053360 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk136o10ex DC047485 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk118l08ex DC041555 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70p24ex DC058056 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk153i08ex DC052820 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk113p10ex DC040082 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk149f11ex DC051521 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk66p01ex DC056444 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk130f12ex DC045368 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk148b10ex DC051120 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk163a20ex DC065064 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk162k22ex DC064945 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk134a02ex DC046542 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk80b13ex DC061309 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk152c04ex DC052388 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk151a04ex DC052041 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk68o06ex DC057065 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.14.0
Major funding for Xenbase is provided by grant P41 HD064556