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Summary Expression Gene Literature (166) GO Terms (10) Nucleotides (159) Proteins (32) Interactants (1401) Wiki
XB-GENEPAGE-1034768

All tropicalis laevis

Nucleotide sequences for sox9 - All

Models - Gene (29)
Models - mRNA (23)
Unigene Clusters (3)
Gurdon EST Clusters (3)
mRNAs (9)
ESTs (83)

Models - Gene (29)

Source Version Model Species
Xenbase 9.1 gene2145 tropicalis
JGI 9.1 Xelaev18002418m.g laevis.L
JGI 9.1 Xelaev18046405m.g laevis.S
JGI 7.1 Xetro.G01973 tropicalis
JGI 7.2 Xelaev16009525m.g laevis.L
JGI 7.2 Xelaev16017091m.g laevis.S
JGI 6.0 XeXenL6RMv10049925m.g laevis.L
JGI 6.0 XeXenL6RMv10041040m.g laevis.S
JGI 4.1 C_scaffold_176000003 tropicalis
ENSEMBL 4.1 ENSXETG00000022348 tropicalis
JGI 4.1 e_gw1.176.29.1 tropicalis
JGI 4.1 e_gw1.176.61.1 tropicalis
JGI 4.1 e_gw1.176.62.1 tropicalis
JGI 4.1 gw1.176.29.1 tropicalis
JGI 4.1 gw1.176.61.1 tropicalis
JGI 4.1 gw1.176.62.1 tropicalis
JGI 4.1 TIM_1004483575 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1760007 tropicalis
JGI 4.1 estExt_Genewise1.C_1760029 tropicalis
JGI 4.1 estExt_Genewise1.C_1760061 tropicalis
JGI 4.1 estExt_Genewise1.C_1760062 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1760018 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1760004 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_176000003 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_176000004 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_176000002 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_176000017 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_176000018 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_176000004 tropicalis

Models - mRNA (23)

Source Version Model Species
Xenbase 9.1 rna7041 tropicalis
JGI 7.1 Xetro.G01973.1 tropicalis
JGI 4.1 C_scaffold_176000003 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_176000004 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_176000018 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_176000017 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_176000002 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_176000004 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_176000003 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1760004 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1760018 tropicalis
JGI 4.1 estExt_Genewise1.C_1760062 tropicalis
JGI 4.1 estExt_Genewise1.C_1760061 tropicalis
JGI 4.1 estExt_Genewise1.C_1760029 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1760007 tropicalis
JGI 4.1 TIM_1004483575 tropicalis
JGI 4.1 gw1.176.62.1 tropicalis
JGI 4.1 gw1.176.61.1 tropicalis
JGI 4.1 gw1.176.29.1 tropicalis
JGI 4.1 e_gw1.176.62.1 tropicalis
JGI 4.1 e_gw1.176.61.1 tropicalis
JGI 4.1 e_gw1.176.29.1 tropicalis
ENSEMBL 4.1 ENSXETT00000048344 tropicalis

Unigene Clusters (3)

ID Species
Str.15584 tropicalis
Xl.28992 laevis.L
Xl.1690 laevis.S

Gurdon EST Clusters (3)

ID Species
1012073718 tropicalis
1012796617 laevis.L
1012782798 laevis.S

mRNAs (9)

Clone Accession Species Library Anatomy Stage
NM_001016853 tropicalis
TNeu111f21 CR855424 tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6638236 BC076783 laevis.L
AY035397 laevis.S
NM_001094473 laevis.L
NM_001090807 laevis.S
AB439583 laevis.L
IMAGE:9041695 BC170060 laevis.S
IMAGE:9041693 BC170058 laevis.S

ESTs (83)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886873 EL844073 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8884288 EL840204 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs01E12 CN072426 5' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st70i19 DC184064 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st58j17 DC181073 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st7n03 DC175246 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st6n03 DC174956 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32d23 DC172593 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7637853 CX407694 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633188 CX374600 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5073 CX936720 5' tropicalis NIH_XGC_tropTe5 testis frog
CAAN11071 CX926597 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7711846 CX969278 5' tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7702710 CX938502 5' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7515156 CX745941 5' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512468 CX741539 5' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
THdA044n17 CR586188 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA034a11 CR582924 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA034d03 CR582815 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053a13 CR582551 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA039j15 CR574058 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019b15 CR571906 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k06 CR442916 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031m13 CR435802 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA046o03 CR425913 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr13C05 CN097448 5' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA029b14 BX744492 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025i10 BX723194 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034g19 BX722810 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA045i23 BX720516 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu111f21 AL792454 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038g17 AL657660 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu023e13 AL638660 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7029902 CF782509 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7029825 CF781574 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7029226 CF781472 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8886873 EL844074 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs01E12 CN072425 3' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst70i19 DC153895 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst58j17 DC150809 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst6n03 DC144628 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst32d23 DC142315 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO5073 CX936719 3' tropicalis NIH_XGC_tropTe5 testis frog
CAAN11071 CX926596 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7702710 CX938501 3' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7515156 CX745940 3' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7711846 CX969277 3' tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7512468 CX741538 3' tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7637853 CX407693 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA044n17 CR586189 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA034a11 CR582925 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA034d03 CR582816 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053a13 CR582552 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA039j15 CR574059 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019b15 CR571907 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k06 CR442917 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031m13 CR435803 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA046o03 CR425914 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr13C05 CN097447 3' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA025i10 BX723195 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034g19 BX722811 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA045i23 BX720517 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu111f21 BX695565 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl331k13 DC132551 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl263m16 DC112887 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7978240 DR725478 5' laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL449e07ex BP685454 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998O1210922 BX846102 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998J108305 BX845028 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL071i13 BJ074818 5' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL094d15 BJ071385 5' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5515589 CF285736 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5162348 BQ397771 5' laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4957283 BI447934 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3550042 BG578012 5' laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3403088 BG364743 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
PBX0107E09 AW641541 5' laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0022D04 AW634573 5' laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL449e07ex BP721338 3' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL094d15 BJ091129 3' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071i13 BJ081408 3' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5162348 BQ397770 3' laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4957283 BI447623 3' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
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