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Summary Expression Phenotypes Gene Literature (6) GO Terms (22) Nucleotides (131) Proteins (51) Interactants (6) Wiki
XB-GENEPAGE-1217654

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bnc1 - All

RefSeq mRNAs(15)
Models - Gene (27)
Models - mRNA (27)
mRNAs (15)
ESTs (17)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
XM_002940098 XM_002940098.5 zinc finger protein basonuclin-1 isoform X2 4702 bp XP_002940144 X. tropicalis
XM_004912617 XM_004912617.4 zinc finger protein basonuclin-1 isoform X1 4437 bp XP_004912674 X. tropicalis
XM_004912619 XM_004912619.4 zinc finger protein basonuclin-1 isoform X3 3466 bp XP_004912676 X. tropicalis
XM_012959517 XM_012959517.2 zinc finger protein basonuclin-1 isoform X2 4435 bp XP_012814971 X. tropicalis
XM_018253138 XM_018253138.2 zinc finger protein basonuclin-1 isoform X1 4660 bp XP_018108627 X. laevis.L
XM_018253139 XM_018253139.2 zinc finger protein basonuclin-1 isoform X1 4865 bp XP_018108628 X. laevis.L
XM_041586801 XM_041586801.1 XP_041442735.1 zinc finger protein basonuclin-1 isoform X2 4799 bp XP_041442735 X. laevis.L
XM_041586802 XM_041586802.1 XP_041442736.1 zinc finger protein basonuclin-1 isoform X2 4764 bp XP_041442736 X. laevis.L
XM_041586803 XM_041586803.1 XP_041442737.1 zinc finger protein basonuclin-1 isoform X2 4697 bp XP_041442737 X. laevis.L
XM_041586804 XM_041586804.1 XP_041442738.1 zinc finger protein basonuclin-1 isoform X3 3694 bp XP_041442738 X. laevis.L
XM_018255379 XM_018255379.2 zinc finger protein basonuclin-1 isoform X1 3981 bp XP_018110868 X. laevis.S
XM_018255380 XM_018255380.2 zinc finger protein basonuclin-1 isoform X2 3877 bp XP_018110869 X. laevis.S
XM_018255381 XM_018255381.2 zinc finger protein basonuclin-1 isoform X1 4201 bp XP_018110870 X. laevis.S
XM_018255384 XM_018255384.2 zinc finger protein basonuclin-1 isoform X1 3889 bp XP_018110873 X. laevis.S
XM_041588275 XM_041588275.1 XP_041444209.1 zinc finger protein basonuclin-1 isoform X1 4112 bp XP_041444209 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g15685 X. laevis.S
NCBI 10.1 XBXL10_1g13253 X. laevis.L
NCBI 10.0 XBXT10g002074 X. tropicalis
ENSEMBL 10.0 bnc1 X. tropicalis
Xenbase 9.2 gene35259 X. laevis.L
Xenbase 9.2 gene20437 X. laevis.S
JGI 9.1 Xelaev18018274m.g X. laevis.L
JGI 9.1 Xelaev18020585m.g X. laevis.S
Xenbase 9.1 gene20523 X. tropicalis
ENSEMBL 9.1 bnc1 X. tropicalis
JGI 7.1 Xetro.C00628 X. tropicalis
JGI 6.0 XeXenL6RMv10001204m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016084 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5620002 X. tropicalis
JGI 4.1 e_gw1.562.11.1 X. tropicalis
JGI 4.1 e_gw1.562.14.1 X. tropicalis
JGI 4.1 e_gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.14.1 X. tropicalis
JGI 4.1 gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.11.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5620003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5620004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000004 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA29302 X. laevis.S
NCBI 10.1 XBmRNA25124 X. laevis.L
ENSEMBL 10.0 ENSXETT00000035077 X. tropicalis
NCBI 10.0 mRNA010433 X. tropicalis
Xenbase 9.2 rna59695 X. laevis.S
Xenbase 9.2 rna75151 X. laevis.L
Xenbase 9.1 rna42383 X. tropicalis
JGI 9.1 Xelaev18020585m X. laevis.S
JGI 9.1 Xelaev18018274m X. laevis.L
ENSEMBL 9.1 ENSXETT00000035077 X. tropicalis
JGI 7.1 Xetro.C00628.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001204m X. laevis.L
JGI 4.1 estExt_Genewise1.C_5620011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5620003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5620002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5620004 X. tropicalis
JGI 4.1 e_gw1.562.33.1 X. tropicalis
JGI 4.1 e_gw1.562.14.1 X. tropicalis
JGI 4.1 e_gw1.562.11.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035077 X. tropicalis
JGI 4.1 gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.14.1 X. tropicalis
JGI 4.1 gw1.562.11.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620033 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620014 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
XM_002940098 X. tropicalis
XM_004912617 X. tropicalis
XM_004912619 X. tropicalis
XM_012959517 X. tropicalis
XM_018253138 X. laevis.L
XM_018253139 X. laevis.L
XM_041586801 X. laevis.L
XM_041586802 X. laevis.L
XM_041586803 X. laevis.L
XM_041586804 X. laevis.L
XM_018255379 X. laevis.S
XM_018255380 X. laevis.S
XM_018255381 X. laevis.S
XM_018255384 X. laevis.S
XM_041588275 X. laevis.S

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas129m03 AL972420 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA005f18 CR417558 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA037f13 CR575845 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037h03 CR575859 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA069c22 BX736679 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7586928 CX312722 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT12533 CX320948 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602620 CX393651 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688382 CX911392 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7602620 DR893114 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA005f18 CR417559 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT12533 CX320947 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA037f13 CR575846 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7586928 CX312721 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA031a10 BX730251 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7688382 CX911391 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8528286 EB468231 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62