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Summary Expression Phenotypes Gene Literature (0) GO Terms (29) Nucleotides (120) Proteins (66) Interactants (12) Wiki
XB-GENEPAGE-1219029

Show:     All X. tropicalis X. laevis

Nucleotide sequences for setdb2 - All

RefSeq mRNAs(15)
Models - Gene (20)
Models - mRNA (23)
mRNAs (18)
ESTs (15)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
NM_001102724 NM_001102724.2 histone-lysine N-methyltransferase SETDB2 4344 bp NP_001096194 X. tropicalis
XM_012956270 XM_012956270.3 histone-lysine N-methyltransferase SETDB2 isoform X1 4611 bp XP_012811724 X. tropicalis
XM_012956271 XM_012956271.3 histone-lysine N-methyltransferase SETDB2 isoform X1 4434 bp XP_012811725 X. tropicalis
XM_012956275 XM_012956275.3 histone-lysine N-methyltransferase SETDB2 isoform X1 4520 bp XP_012811729 X. tropicalis
XM_012956276 XM_012956276.3 histone-lysine N-methyltransferase SETDB2 isoform X1 4466 bp XP_012811730 X. tropicalis
XM_012956278 XM_012956278.3 histone-lysine N-methyltransferase SETDB2 isoform X1 4748 bp XP_012811732 X. tropicalis
XM_012956279 XM_012956279.2 histone-lysine N-methyltransferase SETDB2 isoform X1 4419 bp XP_012811733 X. tropicalis
XM_018091037 XM_018091037.2 histone-lysine N-methyltransferase SETDB2 isoform X1 4659 bp XP_017946526 X. tropicalis
XM_018091040 XM_018091040.2 histone-lysine N-methyltransferase SETDB2 isoform X1 4568 bp XP_017946529 X. tropicalis
XM_031895590 XM_031895590.1 XP_031751450.1 histone-lysine N-methyltransferase SETDB2 isoform X1 4510 bp XP_031751450 X. tropicalis
XM_031895591 XM_031895591.1 XP_031751451.1 histone-lysine N-methyltransferase SETDB2 isoform X1 4511 bp XP_031751451 X. tropicalis
XM_031895592 XM_031895592.1 XP_031751452.1 histone-lysine N-methyltransferase SETDB2 isoform X1 4839 bp XP_031751452 X. tropicalis
XM_031895593 XM_031895593.1 XP_031751453.1 histone-lysine N-methyltransferase SETDB2 isoform X1 4468 bp XP_031751453 X. tropicalis
XM_031895594 XM_031895594.1 XP_031751454.1 histone-lysine N-methyltransferase SETDB2 isoform X2 4047 bp XP_031751454 X. tropicalis
NM_001089296 NM_001089296.1 histone-lysine N-methyltransferase SETDB2 3099 bp NP_001082765 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g10900 X. laevis.S
NCBI 10.0 XBXT10g016980 X. tropicalis
ENSEMBL 10.0 setdb2 X. tropicalis
Xenbase 9.2 gene11529 X. laevis.S
JGI 9.1 Xelaev18016106m.g X. laevis.S
Xenbase 9.1 gene1575 X. tropicalis
ENSEMBL 9.1 setdb2 X. tropicalis
JGI 8.0 Xetrov14010449m.g X. tropicalis
JGI 7.2 Xelaev16063276m.g X. laevis.S
JGI 7.1 Xetro.B01579 X. tropicalis
JGI 6.0 XeXenL6RMv10024503m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000015666 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1670052 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1670036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_167000053 X. tropicalis
JGI 4.1 e_gw1.167.131.1 X. tropicalis
JGI 4.1 gw1.167.131.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_167000021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670130 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1670020 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA20496 X. laevis.S
ENSEMBL 10.0 ENSXETT00000027867 X. tropicalis
ENSEMBL 10.0 ENSXETT00000034176 X. tropicalis
NCBI 10.0 mRNA084093 X. tropicalis
Xenbase 9.2 rna33481 X. laevis.S
Xenbase 9.1 rna5147 X. tropicalis
JGI 9.1 Xelaev18016106m X. laevis.S
ENSEMBL 9.1 ENSXETT00000034176 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027867 X. tropicalis
JGI 8.0 Xetrov14010449m X. tropicalis
JGI 7.2 Xelaev16063276m X. laevis.S
JGI 7.1 Xetro.B01579.1 X. tropicalis
JGI 7.1 Xetro.B01579.2 X. tropicalis
JGI 6.0 XeXenL6RMv10024503m X. laevis.S
JGI 4.1 gw1.167.131.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_167000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_167000053 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1670036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670130 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1670020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1670052 X. tropicalis
JGI 4.1 e_gw1.167.131.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034176 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:7602400 BC135302 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001102724 X. tropicalis
XM_012956270 X. tropicalis
XM_012956271 X. tropicalis
XM_012956275 X. tropicalis
XM_012956276 X. tropicalis
XM_012956278 X. tropicalis
XM_012956279 X. tropicalis
XM_018091037 X. tropicalis
XM_018091040 X. tropicalis
XM_031895590 X. tropicalis
XM_031895591 X. tropicalis
XM_031895592 X. tropicalis
XM_031895593 X. tropicalis
XM_031895594 X. tropicalis
AY145835 X. laevis.S
IMAGE:9093685 BC170303 X. laevis.S
NM_001089296 X. laevis.S

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA059e16 BX744744 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA005m06 BX709356 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8916768 EL830029 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7602400 CX393740 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7655529 CX825657 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAO5733 CX937906 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5733 CX937905 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA005m06 BX709357 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA059e16 BX744745 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7602400 DR893151 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8916768 EL830030 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7655529 CX825656 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:6879035 CB207008 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL173j20 BJ097179 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6879035 CB562542 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage