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Summary Expression Phenotypes Gene Literature (52) GO Terms (8) Nucleotides (114) Proteins (52) Interactants (399) Wiki
XB-GENEPAGE-478130

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxc6 - All

RefSeq mRNAs(6)
Models - Gene (27)
Models - mRNA (29)
mRNAs (12)
ESTs (26)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_004911934 XM_004911934.4 homeobox protein Hox-C6 isoform X1 1451 bp XP_004911991 X. tropicalis
XM_004911935 XM_004911935.4 homeobox protein Hox-C6 isoform X2 1427 bp XP_004911992 X. tropicalis
NM_001087546 NM_001087546.1 homeobox protein Hox-C6 1526 bp NP_001081015 X. laevis.S
XM_018248093 XM_018248093.2 homeobox protein Hox-C6 isoform X1 6253 bp XP_018103582 X. laevis.S
XM_018247557 XM_018247557.2 homeobox protein Hox-C6-like isoform X1 7978 bp XP_018103046 X. laevis.L
XM_018247558 XM_018247558.2 homeobox protein Hox-C6-like isoform X2 7951 bp XP_018103047 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g8243 X. laevis.L
NCBI 10.1 XBXL10_1g10838 X. laevis.S
NCBI 10.0 XBXT10g016525 X. tropicalis
ENSEMBL 10.0 hoxc6 X. tropicalis
Xenbase 9.2 gene37494 X. laevis.L
Xenbase 9.2 gene15038 X. laevis.S
JGI 9.1 Xelaev18013563m.g X. laevis.L
JGI 9.1 Xelaev18016025m.g X. laevis.S
Xenbase 9.1 gene8430 X. tropicalis
JGI 7.2 Xelaev16063154m.g X. laevis.S
JGI 7.1 Xetro.B01504 X. tropicalis
JGI 6.0 XeXenL6RMv10050309m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000023479 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000013 X. tropicalis
JGI 4.1 e_gw1.226.126.1 X. tropicalis
JGI 4.1 e_gw1.226.19.1 X. tropicalis
JGI 4.1 e_gw1.226.86.1 X. tropicalis
JGI 4.1 gw1.226.126.1 X. tropicalis
JGI 4.1 gw1.226.19.1 X. tropicalis
JGI 4.1 gw1.226.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260126 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260007 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA15583 X. laevis.L
NCBI 10.1 XBmRNA20386 X. laevis.S
ENSEMBL 10.0 ENSXETT00000050686 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109290 X. tropicalis
NCBI 10.0 mRNA081772 X. tropicalis
Xenbase 9.2 rna43881 X. laevis.S
Xenbase 9.2 rna78240 X. laevis.L
Xenbase 9.1 rna27271 X. tropicalis
JGI 9.1 Xelaev18013563m X. laevis.L
JGI 9.1 Xelaev18016025m X. laevis.S
JGI 7.2 Xelaev16063154m X. laevis.S
JGI 7.1 Xetro.B01504.1 X. tropicalis
JGI 7.1 Xetro.B01504.2 X. tropicalis
JGI 6.0 XeXenL6RMv10050309m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_2260009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260013 X. tropicalis
JGI 4.1 e_gw1.226.86.1 X. tropicalis
JGI 4.1 e_gw1.226.19.1 X. tropicalis
JGI 4.1 e_gw1.226.126.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050686 X. tropicalis
JGI 4.1 gw1.226.19.1 X. tropicalis
JGI 4.1 gw1.226.86.1 X. tropicalis
JGI 4.1 gw1.226.126.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260126 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260019 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
XM_004911934 X. tropicalis
XM_004911935 X. tropicalis
IMAGE:4757374 BC084319 X. laevis.S
FJ422583 X. laevis.S
NM_001087546 X. laevis.S
X07101 X07101 X. laevis.S
p10 X12499 X. laevis.S
p15 X12500 X. laevis.S
XM_018248093 X. laevis.S
IMAGE:6948047 BC094172 X. laevis.L
XM_018247557 X. laevis.L
XM_018247558 X. laevis.L

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu051o03 AL679740 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064m19 AL778399 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082e04 AL780357 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st32a08 DC172532 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38o23 DC176420 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5382075 BQ393243 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas003n20 AL594098 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu042i11 AL661149 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst32a08 DC142251 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst3b02 DC143639 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst38o23 DC146117 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst39o23 DC146385 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu051o03 BX689067 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382075 BQ393242 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XL011j03 BJ029172 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035n10 BJ042482 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7979275 DR716961 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7976108 DR726059 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982118 DR729856 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4202432 BG554249 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL106o11 BJ068504 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL011j03 BJ043908 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035n10 BJ056437 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL106o11 BJ085737 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7976108 DR726020 3' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:4202432 BG161433 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32