Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (146) GO Terms (6) Nucleotides (177) Proteins (31) Interactants (1176) Wiki
XB-GENEPAGE-478517

All tropicalis laevis

Nucleotide sequences for not - All

Models - Gene (27)
Models - mRNA (20)
Unigene Clusters (4)
Gurdon EST Clusters (2)
mRNAs (10)
ESTs (118)

Models - Gene (27)

Source Version Model Species
JGI 9.1 Xelaev18008736m.g laevis.S
JGI 9.1 Xelaev18004913m.g laevis.L
JGI 7.1 Xetro.A03325 tropicalis
JGI 7.2 Xelaev16023942m.g laevis.S
JGI 7.2 Xelaev16036668m.g laevis.L
JGI 6.0 XeXenL6RMv10000913m.g laevis.S
JGI 6.0 XeXenL6RMv10041244m.g laevis.S
JGI 6.0 XeXenL6RMv10000913m.g laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1980057 tropicalis
ENSEMBL 4.1 ENSXETG00000011780 tropicalis
JGI 4.1 e_gw1.198.322.1 tropicalis
JGI 4.1 e_gw1.198.323.1 tropicalis
JGI 4.1 e_gw1.198.325.1 tropicalis
JGI 4.1 gw1.198.322.1 tropicalis
JGI 4.1 gw1.198.323.1 tropicalis
JGI 4.1 gw1.198.325.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1980045 tropicalis
JGI 4.1 estExt_Genewise1.C_1980321 tropicalis
JGI 4.1 estExt_Genewise1.C_1980322 tropicalis
JGI 4.1 estExt_Genewise1.C_1980324 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1980010 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1980058 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1980013 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_198000010 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_198000057 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_198000058 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_198000013 tropicalis

Models - mRNA (20)

Source Version Model Species
JGI 7.1 Xetro.A03325.1 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1980057 tropicalis
ENSEMBL 4.1 ENSXETT00000025770 tropicalis
JGI 4.1 e_gw1.198.322.1 tropicalis
JGI 4.1 e_gw1.198.323.1 tropicalis
JGI 4.1 e_gw1.198.325.1 tropicalis
JGI 4.1 gw1.198.322.1 tropicalis
JGI 4.1 gw1.198.323.1 tropicalis
JGI 4.1 gw1.198.325.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1980045 tropicalis
JGI 4.1 estExt_Genewise1.C_1980321 tropicalis
JGI 4.1 estExt_Genewise1.C_1980322 tropicalis
JGI 4.1 estExt_Genewise1.C_1980324 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1980010 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1980058 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1980013 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_198000010 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_198000057 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_198000058 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_198000013 tropicalis

Unigene Clusters (4)

ID Species
Str.51815 tropicalis
Str.45697 tropicalis
Xl.35 laevis.S
Xl.1066 laevis.L

Gurdon EST Clusters (2)

ID Species
1012075846 tropicalis
1012837978 laevis.S

mRNAs (10)

Clone Accession Species Library Anatomy Stage
TEgg044k18 CT025280 tropicalis XGC-egg egg unfertilized egg stage
NM_001171198 tropicalis
IMAGE:8318484 BC123237 laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8322189 BC123277 laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
pXNOT Z19577 laevis.S
L19566 laevis.L
NM_001087722 laevis.L
NM_001088156 laevis.S
IMAGE:9041127 BC169493 laevis.S
IMAGE:9041123 BC169489 laevis.S

ESTs (118)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7825648 DN097160 5' tropicalis NIH_XGC_tropOva1 ovary frog
TGas142b19 AL971831 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104m05 AL958693 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107l24 AL966921 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092i05 AL963236 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092j05 AL960510 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127o01 AL959367 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076i05 AL775814 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076j05 AL774118 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039a06 AL653974 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141a22 AL964501 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6989799 CF219382 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989798 CF219384 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989798 CF219383 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7564274 CX474569 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563565 CX473631 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545701 CX488076 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st34j04 DC173199 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7544433 CX460597 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532945 CX434118 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568271 CX456201 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6993281 CF238496 5' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu106i19 AL795829 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108c06 AL790566 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017e01 AL643117 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TEgg044k18 AL883655 5' tropicalis XGC-egg egg unfertilized egg stage
TEgg034n24 AL882426 5' tropicalis XGC-egg egg unfertilized egg stage
TEgg070c19 AL861221 5' tropicalis XGC-egg egg unfertilized egg stage
L1E4b05 AL644705 5' tropicalis XGC-egg egg unfertilized egg stage
IMAGE:7825648 DN097159 3' tropicalis NIH_XGC_tropOva1 ovary frog
TGas141c24 BX764720 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092i05 BX764225 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127o01 BX761105 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142b19 BX757853 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107l24 BX755366 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092j05 BX752902 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076j05 BX750089 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076i05 BX750076 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7564274 CX474568 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544433 CX460596 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568271 CX456200 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532945 CX434117 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst34j04 DC142938 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu108a06 BX698805 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu106i19 BX690359 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TEgg070c19 BX779176 3' tropicalis XGC-egg egg unfertilized egg stage
TEgg034n24 BX772120 3' tropicalis XGC-egg egg unfertilized egg stage
TEgg044k18 BX771830 3' tropicalis XGC-egg egg unfertilized egg stage
IMAGE:7297980 CO388886 5' laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7298870 CO388076 5' laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7299428 CO384446 5' laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6632124 BU907034 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998C0114198 BX843066 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631033 BU906081 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
xl322g02 DC129711 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266a23 DC113572 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl260c03 DC111782 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl298b04 DC122473 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl303j08 DC124112 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL049a03 BJ039280 5' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl336e02 DC133874 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl329m20 DC131986 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl240l20 DC105948 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl225g19 DC101255 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl225b10 DC101147 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl275m20 DC116333 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl303c01 DC123965 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl336e10 DC133879 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl329b18 DC131772 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL155d19 BJ096822 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201d03 BJ622500 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198h08 BJ621721 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170m13 BJ615150 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3751201 BG345843 5' laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
xlk122p19ex DC042973 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3438486 BF615798 5' laevis.S Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
xlk72p23ex DC058703 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk130f18ex DC045373 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk152g04ex DC052461 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL492b22ex BP707656 5' laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL485c16ex BP698569 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk125h13ex DC043787 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8322189 DY550081 5' laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981793 DR717253 5' laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318484 DY564295 5' laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4084851 BG893016 5' laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:6871292 CA983072 5' laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGp998M209022 BX851236 5' laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744955 BF426688 5' laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL049a03 BJ054017 3' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl298b04 DC087639 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl225g19 DC067283 3' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl303c01 DC089106 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl240l20 DC071644 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl260c03 DC077066 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl275m20 DC081389 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl336e10 DC097819 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl336e02 DC097813 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl266a23 DC078728 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15

My Xenbase: [ Log-in / Register ]
version: [4.6.0]

Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556