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Summary Expression Phenotypes Gene Literature (61) GO Terms (154) Nucleotides (665) Proteins (63) Interactants (1324) Wiki
XB-GENEPAGE-479582

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hdac1 - All

RefSeq mRNAs(3)
Models - Gene (34)
Models - mRNA (46)
mRNAs (9)
ESTs (471)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001030393 NM_001030393.1 histone deacetylase 1 1850 bp NP_001025564 X. tropicalis
NM_001085927 NM_001085927.1 probable histone deacetylase 1-B 2227 bp NP_001079396 X. laevis.S
NM_001088022 NM_001088022.1 probable histone deacetylase 1-A 2381 bp NP_001081491 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g10103 X. laevis.S
NCBI 10.1 XBXL10_1g7296 X. laevis.L
NCBI 10.0 XBXT10g014792 X. tropicalis
ENSEMBL 10.0 hdac1 X. tropicalis
Xenbase 9.2 gene11397 X. laevis.L
Xenbase 9.2 gene5062 X. laevis.S
JGI 9.1 Xelaev18012537m.g X. laevis.L
JGI 9.1 Xelaev18015210m.g X. laevis.S
Xenbase 9.1 gene2890 X. tropicalis
ENSEMBL 9.1 hdac1 X. tropicalis
JGI 7.2 Xelaev16039979m.g X. laevis.L
JGI 7.2 Xelaev16018926m.g X. laevis.S
JGI 7.1 Xetro.B00222 X. tropicalis
JGI 6.0 XeXenL6RMv10015755m.g X. laevis.L
JGI 6.0 XeXenL6RMv10046148m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000005253 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4690008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_469000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_469000026 X. tropicalis
JGI 4.1 e_gw1.469.36.1 X. tropicalis
JGI 4.1 e_gw1.469.37.1 X. tropicalis
JGI 4.1 e_gw1.469.38.1 X. tropicalis
JGI 4.1 gw1.469.36.1 X. tropicalis
JGI 4.1 gw1.469.37.1 X. tropicalis
JGI 4.1 gw1.469.38.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4690013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4690024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4690025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4690007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_469000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_469000025 X. tropicalis

mRNAs based on gene models(46)

Source Version Model Species
NCBI 10.1 XBmRNA18870 X. laevis.S
NCBI 10.1 XBmRNA13729 X. laevis.L
ENSEMBL 10.0 ENSXETT00000097881 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102710 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072056 X. tropicalis
ENSEMBL 10.0 ENSXETT00000011480 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078860 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069073 X. tropicalis
NCBI 10.0 mRNA073091 X. tropicalis
Xenbase 9.2 rna33120 X. laevis.L
Xenbase 9.2 rna14789 X. laevis.S
Xenbase 9.1 rna9477 X. tropicalis
JGI 9.1 Xelaev18012537m X. laevis.L
ENSEMBL 9.1 ENSXETT00000011480 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069073 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072056 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078860 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079346 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097881 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102710 X. tropicalis
JGI 9.1 Xelaev18015210m X. laevis.S
JGI 7.2 Xelaev16018926m X. laevis.S
JGI 7.2 Xelaev16039979m X. laevis.L
JGI 7.1 Xetro.B00222.2 X. tropicalis
JGI 7.1 Xetro.B00222.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015755m X. laevis.L
JGI 6.0 XeXenL6RMv10046148m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_469000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_469000008 X. tropicalis
JGI 4.1 gw1.469.36.1 X. tropicalis
JGI 4.1 gw1.469.37.1 X. tropicalis
JGI 4.1 gw1.469.38.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_469000008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4690036 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4690013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4690007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4690025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4690024 X. tropicalis
JGI 4.1 e_gw1.469.36.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4690008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000011480 X. tropicalis
JGI 4.1 e_gw1.469.38.1 X. tropicalis
JGI 4.1 e_gw1.469.37.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_469000025 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:5308481 BC090604 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu105b18 CT030593 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001030393 X. tropicalis
AF020658 X. laevis.S
IMAGE:4683530 BC041296 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001085927 X. laevis.S
IMAGE:6862376 BC081136 X. laevis.L
NM_001088022 X. laevis.L
X78454 X78454 X. laevis.L

ESTs (471)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7557588 CX506315 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA023i18 CR574291 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA011a23 CR566428 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7571050 CX512049 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA011m14 CR562186 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7566849 DR889585 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA028l05 CR411259 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA007p11 CR409733 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA013b03 CR409357 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7091695 CK654398 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu093b10 AL804205 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu142f20 AL803841 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095b13 AL803399 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098h05 AL802988 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123a12 AL802167 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128j23 AL798133 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113d22 AL794496 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu116k05 AL794126 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117f11 AL791945 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu138e23 AL789220 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105b18 AL786404 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082k16 AL780394 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065a02 AL777710 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056i03 AL677152 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu057m04 AL675418 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062p07 AL673548 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052g13 AL673151 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049g02 AL662393 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038p18 AL661408 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu044j03 AL660574 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048j12 AL659776 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048c18 AL659593 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034b15 AL656237 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu026k23 AL644201 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu003c12 AL640175 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022f20 AL639141 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu005d22 AL635094 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991467 CF263910 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6993391 CF238379 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6986869 CF221710 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5309193 BQ392404 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308481 BQ391023 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308141 BQ390317 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307573 BQ389528 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA007d08 CR561068 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003f14 CR560320 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080p12 CR444017 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA022l01 CR438614 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069a02 CR436834 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044a09 CR427629 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060o14 CR427624 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA046e02 CR427511 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA063k17 CR425765 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028c05 CR419716 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA029a11 CR419614 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025k06 CR418947 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA037k13 CR418630 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:4439945 BG348591 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TTbA026a15 CR418345 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6978768 CF150023 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:4461203 BG884682 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas010i13 AL628539 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas011a07 AL629121 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas024h24 AL629853 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas019j15 AL631598 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021m09 AL632627 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas048k14 AL646255 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047n20 AL646361 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036l17 AL648152 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044d01 AL655107 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059a10 AL674757 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057j20 AL681645 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080c17 AL782608 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123l15 AL955734 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108f13 AL956639 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109b03 AL956692 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087g08 AL960345 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142e02 AL962939 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas121l04 AL967391 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096c17 AL969502 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9016804 EL864434 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas122j11 AL970697 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas140e15 AL971562 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139f08 AL972961 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119j08 AL973253 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5380019 BQ524095 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6980788 CF149946 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379752 BQ524138 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:9015404 EL862185 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8914972 EL837988 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8858944 EL823087 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926126 EL672524 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7744515 DN038071 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7733739 DN017888 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717433 CX978460 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708565 CX961853 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7666310 CX852222 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7584573 CX415167 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT5216 CX414166 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41