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Summary Expression Phenotypes Gene Literature (5) GO Terms (35) Nucleotides (183) Proteins (59) Interactants (20) Wiki
XB-GENEPAGE-479715

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ctdp1 - All

RefSeq mRNAs(5)
Models - Gene (32)
Models - mRNA (40)
mRNAs (10)
ESTs (57)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001017022 NM_001017022.2 RNA polymerase II subunit A C-terminal domain phosphatase 1864 bp NP_001017022 X. tropicalis
XM_012964765 XM_012964765.2 RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 4183 bp XP_012820219 X. tropicalis
NM_001094383 NM_001094383.1 CTD phosphatase subunit 1 S homeolog 4582 bp NP_001087852 X. laevis.S
XM_041567209 XM_041567209.1 XP_041423143.1 CTD phosphatase subunit 1 S homeolog isoform X1 3868 bp XP_041423143 X. laevis.S
XM_041566344 XM_041566344.1 XP_041422278.1 RNA polymerase II subunit A C-terminal domain phosphatase 4192 bp XP_041422278 X. laevis.L

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g27720 X. laevis.L
NCBI 10.1 XBXL10_1g29397 X. laevis.S
NCBI 10.0 XBXT10g010637 X. tropicalis
ENSEMBL 10.0 ctdp1 X. tropicalis
Xenbase 9.2 gene6068 X. laevis.S
Xenbase 9.2 gene2555 X. laevis.L
JGI 9.1 Xelaev18031750m.g X. laevis.L
JGI 9.1 Xelaev18033529m.g X. laevis.S
Xenbase 9.1 gene24828 X. tropicalis
ENSEMBL 9.1 ctdp1 X. tropicalis
JGI 7.2 Xelaev16030669m.g X. laevis.S
JGI 7.1 Xetro.F00716 X. tropicalis
JGI 6.0 XeXenL6RMv10007463m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000856 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2130009 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_213000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_213000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_213000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2130004 X. tropicalis
JGI 4.1 e_gw1.213.29.1 X. tropicalis
JGI 4.1 e_gw1.213.33.1 X. tropicalis
JGI 4.1 e_gw1.213.58.1 X. tropicalis
JGI 4.1 e_gw1.213.59.1 X. tropicalis
JGI 4.1 e_gw1.213.64.1 X. tropicalis
JGI 4.1 gw1.213.58.1 X. tropicalis
JGI 4.1 gw1.213.59.1 X. tropicalis
JGI 4.1 gw1.213.64.1 X. tropicalis
JGI 4.1 gw1.213.29.1 X. tropicalis
JGI 4.1 gw1.213.33.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130058 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130064 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA52029 X. laevis.L
NCBI 10.1 XBmRNA55249 X. laevis.S
NCBI 10.0 mRNA052595 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001901 X. tropicalis
Xenbase 9.2 rna7431 X. laevis.L
Xenbase 9.2 rna17755 X. laevis.S
ENSEMBL 9.1 ENSXETT00000001901 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061162 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066726 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071287 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096733 X. tropicalis
Xenbase 9.1 rna49366 X. tropicalis
JGI 9.1 Xelaev18033529m X. laevis.S
JGI 9.1 Xelaev18031750m X. laevis.L
ENSEMBL 9.1 ENSXETT00000098718 X. tropicalis
JGI 7.2 Xelaev16030669m X. laevis.S
JGI 7.1 Xetro.F00716.3 X. tropicalis
JGI 7.1 Xetro.F00716.2 X. tropicalis
JGI 7.1 Xetro.F00716.4 X. tropicalis
JGI 7.1 Xetro.F00716.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007463m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_213000002 X. tropicalis
JGI 4.1 e_gw1.213.33.1 X. tropicalis
JGI 4.1 e_gw1.213.58.1 X. tropicalis
JGI 4.1 e_gw1.213.59.1 X. tropicalis
JGI 4.1 e_gw1.213.64.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001901 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2130009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2130004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130058 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2130064 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_213000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_213000005 X. tropicalis
JGI 4.1 e_gw1.213.29.1 X. tropicalis
JGI 4.1 gw1.213.29.1 X. tropicalis
JGI 4.1 gw1.213.33.1 X. tropicalis
JGI 4.1 gw1.213.58.1 X. tropicalis
JGI 4.1 gw1.213.59.1 X. tropicalis
JGI 4.1 gw1.213.64.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
TEgg007i07 CR762118 X. tropicalis
NM_001017022 X. tropicalis
XM_012964765 X. tropicalis
IMAGE:6865015 BC082378 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094383 X. laevis.S
XM_041567209 X. laevis.S
OMEGA-AB AJ132385 X. laevis.L
IMAGE:6639477 BC092306 X. laevis.L
NM_001088257 X. laevis.L
XM_041566344 X. laevis.L

ESTs (57)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas044i05 AL655051 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7522218 CX471254 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas049o08 AL649622 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu037k12 AL657930 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu050i24 AL661775 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137k04 AL786047 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas136i19 AL967613 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7688740 CX912264 5' X. tropicalis NIH_XGC_tropTe4 testis frog
st60o24 DC181637 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6990291 CF217888 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8928497 EL677011 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st37c05 DC175899 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7694004 CX921411 5' X. tropicalis NIH_XGC_tropTe4 testis frog
st47b16 DC178345 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7625157 CX402877 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu123n03 AL802141 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas020i05 AL632515 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7694004 CX921410 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688740 CX912263 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7625157 DR899532 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8928497 EL677010 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst47b16 DC148068 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xl280d09 DC117610 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0098H03 AW640781 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0109F01 AW641723 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6868694 CA982324 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6636267 BU910457 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5155251 CA789794 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5155814 CA792906 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865015 CB209666 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL149n09 BJ095416 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200m19 BJ622390 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnga002f20 AW200305 5' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
xl230k22 DC102871 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl240g24 DC105852 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0060H08 AW637644 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl307e06 DC125233 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL464m04ex BP691501 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL478i22ex BP695800 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL408k12ex BP700423 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL490k21ex BP700748 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk145g16ex DC050258 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk2n15ex DC053558 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6872825 CB197908 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL078n19 BJ064259 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL096f17 BJ072050 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL077o17 BJ082086 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL464m04ex BP725964 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl280d09 DC082903 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl240g24 DC071554 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XENOPUS_SOURCE_ID:xlnga002f20 AW199257 3' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
XL200m19 BJ639064 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL149n09 BJ099223 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL063e12 BJ078162 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk2n15ex DC020189 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk145g16ex DC016941 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL478i22ex BP729651 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5