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Summary Expression Phenotypes Gene Literature (25) GO Terms (29) Nucleotides (152) Proteins (50) Interactants (300) Wiki
XB-GENEPAGE-480617

Show:     All X. tropicalis X. laevis

Nucleotide sequences for irx2 - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (35)
mRNAs (6)
ESTs (62)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001008112 NM_001008112.1 iroquois-class homeodomain protein irx-2 2426 bp NP_001008113 X. tropicalis
NM_001085766 NM_001085766.1 iroquois-class homeodomain protein irx-2 2453 bp NP_001079235 X. laevis.L
XM_018269374 XM_018269374.2 iroquois-class homeodomain protein irx-2-like 2593 bp XP_018124863 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g29187 X. laevis.S
NCBI 10.1 XBXL10_1g27427 X. laevis.L
NCBI 10.0 XBXT10g001422 X. tropicalis
ENSEMBL 10.0 irx2 X. tropicalis
Xenbase 9.2 gene45711 X. laevis.S
Xenbase 9.2 gene11386 X. laevis.L
JGI 9.1 Xelaev18033307m.g X. laevis.S
JGI 9.1 Xelaev18031337m.g X. laevis.L
Xenbase 9.1 gene859 X. tropicalis
ENSEMBL 9.1 irx2 X. tropicalis
JGI 8.0 Xetrov14046134m.g X. tropicalis
JGI 7.2 Xelaev16051390m.g X. laevis.L
JGI 7.1 Xetro.F00978 X. tropicalis
JGI 6.0 XeXenL6RMv10050515m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012653 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_131000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000020 X. tropicalis
JGI 4.1 gw1.131.173.1 X. tropicalis
JGI 4.1 gw1.131.174.1 X. tropicalis
JGI 4.1 gw1.131.183.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1310005 X. tropicalis
JGI 4.1 e_gw1.131.173.1 X. tropicalis
JGI 4.1 e_gw1.131.174.1 X. tropicalis
JGI 4.1 e_gw1.131.183.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310174 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310183 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1310002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_131000002 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA54865 X. laevis.S
NCBI 10.1 XBmRNA51440 X. laevis.L
ENSEMBL 10.0 ENSXETT00000027698 X. tropicalis
NCBI 10.0 mRNA007186 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081914 X. tropicalis
Xenbase 9.2 rna33092 X. laevis.L
Xenbase 9.2 rna90213 X. laevis.S
Xenbase 9.1 rna2749 X. tropicalis
JGI 9.1 Xelaev18033307m X. laevis.S
JGI 9.1 Xelaev18031337m X. laevis.L
ENSEMBL 9.1 ENSXETT00000081914 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027698 X. tropicalis
JGI 8.0 Xetrov14046134m X. tropicalis
JGI 7.2 Xelaev16051390m X. laevis.L
JGI 7.1 Xetro.F00978.1 X. tropicalis
JGI 6.0 XeXenL6RMv10050515m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_1310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310020 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1310002 X. tropicalis
JGI 4.1 e_gw1.131.183.1 X. tropicalis
JGI 4.1 e_gw1.131.174.1 X. tropicalis
JGI 4.1 e_gw1.131.173.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027698 X. tropicalis
JGI 4.1 gw1.131.183.1 X. tropicalis
JGI 4.1 gw1.131.173.1 X. tropicalis
JGI 4.1 gw1.131.174.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_131000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310183 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_131000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310174 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310173 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1310005 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:6989141 BC081317 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001008112 X. tropicalis
AJ001835 AJ001835 X. laevis.L
IMAGE:5516094 BC077951 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001085766 X. laevis.L
XM_018269374 X. laevis.S

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7612153 CX404409 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610857 CX377721 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620736 CX341241 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787550 CX329912 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT14091 CX325272 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA050i01 CR450015 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu111g19 AL793566 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043o10 AL658214 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6989141 CF219710 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7574891 CX441837 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525622 CX443042 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas006c19 AL595380 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7568168 CX456477 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas036k10 AL651577 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7563261 CX467856 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas136o07 AL967637 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7563838 CX473872 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st80b11 DC186520 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7550829 CX509358 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572289 CX513656 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534164 CX428281 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9011460 EL856633 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7673480 CX883302 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7584418 CX415396 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612153 CX404408 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7534164 CX428280 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574891 CX441836 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568168 CX456476 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563261 CX467855 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563838 CX473871 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550829 CX509357 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572289 DR889732 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu111g19 BX695583 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7516454 CX747638 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTbA050i01 CR450016 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT14091 CX325271 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620736 CX341240 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4462926 BG885717 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7584418 CX415395 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610857 DR895674 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7673480 CX883301 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XL441l17ex BP683039 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl224g17 DC100942 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8321927 DY544571 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:5516094 CF286200 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8321626 DY551551 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk4i15ex DC054081 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk162c09ex DC064775 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl232l08 DC103483 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl225g17 DC101253 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL441l17ex BP719267 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk4i15ex DC020700 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk162c09ex DC031242 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl227k03 DC067914 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl225g17 DC067281 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl230o02 DC068831 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl224g17 DC066991 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl325m02 DC094889 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl324a09 DC094398 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl231n02 DC069103 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl232l08 DC069347 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL425j13ex BP714510 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5