Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (20) GO Terms (70) Nucleotides (8279) Proteins (73) Interactants (576) Wiki
XB-GENEPAGE-480745

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ybx1 - All

RefSeq mRNAs(5)
Models - Gene (37)
Models - mRNA (47)
mRNAs (16)
ESTs (7235)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001016677 NM_001016677.2 Y-box-binding protein 1 1476 bp NP_001016677 X. tropicalis
NM_001085898 NM_001085898.1 Y-box-binding protein 1 1473 bp NP_001079367 X. laevis.L
NM_001086861 NM_001086861.1 B box-binding protein 1426 bp NP_001080330 X. laevis.S
XM_018226803 XM_018226803.1 B box-binding protein isoform X1 1539 bp XP_018082292 X. laevis.S
XM_041570377 XM_041570377.1 XP_041426311.1 B box-binding protein isoform X1 1710 bp XP_041426311 X. laevis.S

Models - Gene (37)

Source Version Model Species
NCBI 10.1 XBXL10_1g31311 X. laevis.L
NCBI 10.1 XBXL10_1g33477 X. laevis.S
NCBI 10.0 XBXT10g003060 X. tropicalis
ENSEMBL 10.0 ybx1 X. tropicalis
Xenbase 9.2 gene8127 X. laevis.S
Xenbase 9.2 gene682 X. laevis.L
Xenbase 9.1 gene8205 X. tropicalis
ENSEMBL 9.1 ybx1 X. tropicalis
JGI 8.0 Xetrov14030728m.g X. tropicalis
JGI 7.2 Xelaev16002227m.g X. laevis.L
JGI 7.1 Xetro.J00693 X. tropicalis
JGI 6.0 XeXenL6RMv10001828m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013436 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570031 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570032 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2570014 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_257000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000031 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_257000014 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000005 X. tropicalis
JGI 4.1 e_gw1.257.116.1 X. tropicalis
JGI 4.1 e_gw1.257.117.1 X. tropicalis
JGI 4.1 e_gw1.257.70.1 X. tropicalis
JGI 4.1 gw1.257.116.1 X. tropicalis
JGI 4.1 gw1.257.117.1 X. tropicalis
JGI 4.1 gw1.257.70.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570070 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570117 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2570007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570030 X. tropicalis

mRNAs based on gene models(47)

Source Version Model Species
NCBI 10.1 XBmRNA63172 X. laevis.S
NCBI 10.1 XBmRNA59222 X. laevis.L
ENSEMBL 10.0 ENSXETT00000120660 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101882 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121433 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029443 X. tropicalis
NCBI 10.0 mRNA015537 X. tropicalis
Xenbase 9.2 rna23676 X. laevis.S
Xenbase 9.2 rna1990 X. laevis.L
ENSEMBL 9.1 ENSXETT00000029443 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101882 X. tropicalis
Xenbase 9.1 rna26510 X. tropicalis
JGI 8.0 Xetrov14030728m X. tropicalis
JGI 7.2 Xelaev16002227m X. laevis.L
JGI 7.1 Xetro.J00693.5 X. tropicalis
JGI 7.1 Xetro.J00693.7 X. tropicalis
JGI 7.1 Xetro.J00693.6 X. tropicalis
JGI 7.1 Xetro.J00693.1 X. tropicalis
JGI 7.1 Xetro.J00693.2 X. tropicalis
JGI 7.1 Xetro.J00693.3 X. tropicalis
JGI 7.1 Xetro.J00693.4 X. tropicalis
JGI 6.0 XeXenL6RMv10001828m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_2570007 X. tropicalis
JGI 4.1 e_gw1.257.117.1 X. tropicalis
JGI 4.1 e_gw1.257.70.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029443 X. tropicalis
JGI 4.1 e_gw1.257.116.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570117 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_257000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000031 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_257000014 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570030 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000007 X. tropicalis
JGI 4.1 gw1.257.116.1 X. tropicalis
JGI 4.1 gw1.257.117.1 X. tropicalis
JGI 4.1 gw1.257.70.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570031 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2570014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570070 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
IMAGE:9040091 BC170833 X. tropicalis
IMAGE:9040093 BC170835 X. tropicalis
NM_001016677 X. tropicalis
TNeu074h11 CR760096 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu081b14 CR760222 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA008a12 CU075424 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:4681490 BC041191 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7975474 BC106323 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
S10-57-h3 AF550003 X. laevis.S
IMAGE:5570493 BC042217 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086861 X. laevis.S
X60217 X. laevis.S
XM_018226803 X. laevis.S
XM_041570377 X. laevis.S
M59453 X. laevis.L
NM_001085898 X. laevis.L

ESTs (7235)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu072m16 BX683583 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu067i10 BX683709 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu060l18 AL676765 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051j17 AL677610 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas053i02 AL678043 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059k17 AL678646 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu054j05 AL678805 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054l07 AL678817 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054i18 AL678901 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu057n03 AL679477 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058m17 AL679657 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051o05 AL679741 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056h22 AL679792 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas061o19 AL680200 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060c15 AL681700 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060k13 AL681746 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060o08 AL682033 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas067g18 AL682397 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas069g03 AL682569 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas069k23 AL682600 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059p12 AL682872 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071a22 AL773780 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077c17 AL774012 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079k06 AL775069 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072h11 AL775541 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu080m13 AL775926 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079b17 AL776124 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076j18 AL776267 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075n10 AL776373 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074b20 AL776477 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas082f14 AL776679 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas082g14 AL777263 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu063g01 AL777478 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065j17 AL777586 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065n05 AL777602 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077c08 AL777840 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091a11 AL777997 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066c09 AL778253 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064i09 AL778373 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075d17 AL778754 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084e17 AL779052 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072e12 AL779409 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072m16 AL779456 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073k17 AL779522 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073m07 AL779528 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078f14 AL779887 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082o10 AL780414 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071k03 AL780433 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071b09 AL780466 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071n15 AL780536 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071e10 AL780577 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069c11 AL780741 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069k15 AL780787 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069o15 AL780808 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093p21 AL780834 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074h11 AL781982 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073h15 AL782070 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070k02 AL782261 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas083g07 AL782487 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079g23 AL782551 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084j01 AL782868 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084n23 AL782897 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084a10 AL782996 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073b11 AL783072 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu064h12 AL783254 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068k04 AL783357 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065g23 AL783434 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068f11 AL783835 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas084d08 AL783927 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas082g03 AL784181 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu067i10 AL784563 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079m08 AL784755 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093a05 AL785363 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076g23 AL785618 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075k11 AL785722 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu132k01 AL785804 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137f19 AL785860 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085j05 AL786583 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085g24 AL786829 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096l16 AL786931 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094i24 AL787284 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123a11 AL787541 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136o12 AL787729 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu134o10 AL787815 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu112m04 AL788229 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu141b19 AL788947 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu141f13 AL788965 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136e10 AL789604 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144o12 AL789679 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133k18 AL789745 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133m10 AL789752 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu134k13 AL789824 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108l03 AL790441 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu097p02 AL791750 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120d21 AL792026 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122h23 AL792643 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117b15 AL792695 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335307 BQ520358 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335503 BQ520454 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27