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Summary Expression Phenotypes Gene Literature (80) GO Terms (79) Nucleotides (159) Proteins (57) Interactants (603) Wiki
XB-GENEPAGE-481105

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hdac3 - All

RefSeq mRNAs(2)
Models - Gene (32)
Models - mRNA (43)
mRNAs (4)
ESTs (46)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001016883 NM_001016883.2 histone deacetylase 3 3096 bp NP_001016883 X. tropicalis
XM_018256234 XM_018256234.2 histone deacetylase 3 1615 bp XP_018111723 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g16578 X. laevis.S
NCBI 10.0 XBXT10g013247 X. tropicalis
ENSEMBL 10.0 hdac3 X. tropicalis
Xenbase 9.2 gene15161 X. laevis.S
JGI 9.1 Xelaev18021566m.g X. laevis.S
Xenbase 9.1 gene7379 X. tropicalis
ENSEMBL 9.1 hdac3 X. tropicalis
JGI 8.0 Xetrov14015747m.g X. tropicalis
JGI 7.2 Xelaev16012030m.g X. laevis.S
JGI 7.1 Xetro.C01044 X. tropicalis
JGI 6.0 XeXenL6RMv10043482m.g X. laevis.S
JGI 6.0 XeXenL6RMv10048642m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000002708 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5460004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_546000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5460001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_546000020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_546000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_546000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_546000001 X. tropicalis
JGI 4.1 e_gw1.546.125.1 X. tropicalis
JGI 4.1 e_gw1.546.25.1 X. tropicalis
JGI 4.1 e_gw1.546.95.1 X. tropicalis
JGI 4.1 gw1.546.125.1 X. tropicalis
JGI 4.1 gw1.546.25.1 X. tropicalis
JGI 4.1 gw1.546.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5460017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460095 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460125 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5460020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5460021 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA31126 X. laevis.S
NCBI 10.0 mRNA065576 X. tropicalis
ENSEMBL 10.0 ENSXETT00000005840 X. tropicalis
Xenbase 9.2 rna44266 X. laevis.S
ENSEMBL 9.1 ENSXETT00000086272 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087481 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092001 X. tropicalis
ENSEMBL 9.1 ENSXETT00000005840 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078785 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093707 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098139 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102405 X. tropicalis
Xenbase 9.1 rna23822 X. tropicalis
JGI 9.1 Xelaev18021566m X. laevis.S
JGI 8.0 Xetrov14015747m X. tropicalis
JGI 7.2 Xelaev16012030m X. laevis.S
JGI 7.1 Xetro.C01044.2 X. tropicalis
JGI 7.1 Xetro.C01044.1 X. tropicalis
JGI 7.1 Xetro.C01044.3 X. tropicalis
JGI 6.0 XeXenL6RMv10048642m X. laevis.S
JGI 6.0 XeXenL6RMv10043482m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_546000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_546000020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_546000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_546000004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_546000003 X. tropicalis
JGI 4.1 gw1.546.125.1 X. tropicalis
JGI 4.1 gw1.546.25.1 X. tropicalis
JGI 4.1 gw1.546.95.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005840 X. tropicalis
JGI 4.1 e_gw1.546.125.1 X. tropicalis
JGI 4.1 e_gw1.546.95.1 X. tropicalis
JGI 4.1 e_gw1.546.25.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5460020 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5460001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5460021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5460004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5460017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460095 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5460125 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
TEgg067n06 CR848582 X. tropicalis
NM_001016883 X. tropicalis
IMAGE:6859192 BC070873 X. laevis.S
XM_018256234 X. laevis.S

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA074p24 BX737042 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7558996 CX514130 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7798550 DN059524 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7618483 CX363526 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7744320 DN037687 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
xtbs03H13 CN073546 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7717061 CX977872 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7660356 CX841154 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687614 CX909955 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696186 CX925885 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692092 CX917912 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6988915 CF219911 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7695727 CX924618 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA047b10 CR420367 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas117b22 AL956856 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA055k24 CR433996 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144h17 AL972822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA027j02 CR572279 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8919282 EL833490 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA027j08 CR583202 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8858565 EL822239 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA037c05 BX736634 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8919282 EL833491 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas144h17 BX761663 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7558996 CX514129 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA047b10 CR420368 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055k24 CR433997 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA027j02 CR572280 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA027j08 CR583203 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA074p24 BX737043 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7618483 CX363525 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs03H13 CN073545 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7660356 CX841153 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7692092 CX917911 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695727 CX924617 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696186 CX925884 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717061 CX977871 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7798550 DN059523 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8858565 EL822240 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:6864850 CA988061 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3745844 BE680586 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL402n13ex BP678770 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk51j07ex DC032956 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk119g11ex DC041782 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk52j07ex DC033283 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3745844 BE678101 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)