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Summary Expression Phenotypes Gene Literature (41) GO Terms (33) Nucleotides (91) Proteins (42) Interactants (524) Wiki
XB-GENEPAGE-481972

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxa9 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (30)
mRNAs (5)
ESTs (17)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_031904147 XM_031904147.1 XP_031760007.1 homeobox protein Hox-A9 6526 bp XP_031760007 X. tropicalis
NM_001097795 NM_001097795.1 homeobox A9 S homeolog 1847 bp NP_001091264 X. laevis.S
XM_018267416 XM_018267416.2 homeobox protein Hox-A9 5644 bp XP_018122905 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g28968 X. laevis.S
NCBI 10.1 XBXL10_1g27097 X. laevis.L
NCBI 10.0 XBXT10g000144 X. tropicalis
Xenbase 9.2 gene2368 X. laevis.S
Xenbase 9.2 gene16648 X. laevis.L
JGI 9.1 Xelaev18033075m.g X. laevis.S
JGI 9.1 Xelaev18030994m.g X. laevis.L
JGI 7.2 Xelaev16021612m.g X. laevis.L
JGI 7.2 Xelaev16080913m.g X. laevis.S
JGI 7.1 Xetro.F01332 X. tropicalis
JGI 6.0 XeXenL6RMv10002124m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000724 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_560009 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_560007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000037 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000038 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_56000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_56000007 X. tropicalis
JGI 4.1 e_gw1.56.125.1 X. tropicalis
JGI 4.1 e_gw1.56.222.1 X. tropicalis
JGI 4.1 e_gw1.56.8.1 X. tropicalis
JGI 4.1 gw1.56.125.1 X. tropicalis
JGI 4.1 gw1.56.222.1 X. tropicalis
JGI 4.1 gw1.56.8.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_560021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560125 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560222 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560037 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA50750 X. laevis.L
NCBI 10.1 XBmRNA54501 X. laevis.S
NCBI 10.0 mRNA000827 X. tropicalis
Xenbase 9.2 rna48643 X. laevis.L
Xenbase 9.2 rna6891 X. laevis.S
JGI 9.1 Xelaev18030994m X. laevis.L
JGI 9.1 Xelaev18033075m X. laevis.S
JGI 7.2 Xelaev16021612m X. laevis.L
JGI 7.2 Xelaev16080913m X. laevis.S
JGI 7.1 Xetro.F01332.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002124m X. laevis.S
JGI 4.1 estExt_Genewise1.C_560222 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560125 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_560021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_560009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560038 X. tropicalis
JGI 4.1 gw1.56.222.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_560007 X. tropicalis
JGI 4.1 e_gw1.56.8.1 X. tropicalis
JGI 4.1 e_gw1.56.222.1 X. tropicalis
JGI 4.1 e_gw1.56.125.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001611 X. tropicalis
JGI 4.1 gw1.56.8.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560037 X. tropicalis
JGI 4.1 gw1.56.125.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_56000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000038 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000037 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_56000007 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
XM_031904147 X. tropicalis
XR_004223234 X. tropicalis
IMAGE:4174190 BC130086 X. laevis.S
NM_001097795 X. laevis.S
XM_018267416 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7849761 DT387310 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
st52p24 DC179736 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA019o06 CR424423 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA020o06 CR427940 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA056d09 CR437688 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA032j20 CR446033 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6982076 CF225980 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TTbA019o06 CR424424 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
rst52p24 DC149438 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA020o06 CR427941 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6982076 CF225981 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TTbA056d09 CR437689 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7849761 DT387309 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:3398687 BE575380 5' X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL016j10 BJ032408 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL016j10 BJ047440 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3398687 BE505501 3' X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25