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Summary Expression Phenotypes Gene Literature (155) GO Terms (98) Nucleotides (164) Proteins (70) Interactants (1308) Wiki
XB-GENEPAGE-482491

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pitx2 - All

RefSeq mRNAs(5)
Models - Gene (40)
Models - mRNA (49)
mRNAs (14)
ESTs (44)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001017227 NM_001017227.2 pituitary homeobox 2 2385 bp NP_001017227 X. tropicalis
NM_001088287 NM_001088287.1 paired like homeodomain 2 L homeolog 1060 bp NP_001081756 X. laevis.L
NM_001085586 NM_001085586.1 paired like homeodomain 2 S homeolog 951 bp NP_001079055 X. laevis.S
XM_018232448 XM_018232448.2 paired like homeodomain 2 S homeolog isoform X1 2263 bp XP_018087937 X. laevis.S
XM_018232456 XM_018232456.2 paired like homeodomain 2 S homeolog isoform X2 2027 bp XP_018087945 X. laevis.S

Models - Gene (40)

Source Version Model Species
NCBI 10.1 XBXL10_1g4032 X. laevis.S
NCBI 10.1 XBXL10_1g1124 X. laevis.L
NCBI 10.0 XBXT10g013194 X. tropicalis
ENSEMBL 10.0 pitx2 X. tropicalis
Xenbase 9.2 gene41052 X. laevis.L
Xenbase 9.2 gene14181 X. laevis.S
JGI 9.1 Xelaev18005645m.g X. laevis.L
JGI 9.1 Xelaev18009341m.g X. laevis.S
Xenbase 9.1 gene5249 X. tropicalis
ENSEMBL 9.1 pitx2 X. tropicalis
JGI 7.2 Xelaev16077473m.g X. laevis.L
JGI 7.2 Xelaev16046655m.g X. laevis.S
JGI 7.1 Xetro.A02661 X. tropicalis
JGI 6.0 XeXenL6RMv10006867m.g X. laevis.L
JGI 6.0 XeXenL6RMv10006867m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013330 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_890001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000002 X. tropicalis
JGI 4.1 e_gw1.89.94.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_89000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000012 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000003 X. tropicalis
JGI 4.1 e_gw1.89.97.1 X. tropicalis
JGI 4.1 e_gw1.89.98.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_89000002 X. tropicalis
JGI 4.1 gw1.89.94.1 X. tropicalis
JGI 4.1 gw1.89.97.1 X. tropicalis
JGI 4.1 gw1.89.98.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_890002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890098 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_890001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_890002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_890010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_890011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_890012 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.1 XBmRNA7372 X. laevis.S
NCBI 10.1 XBmRNA1765 X. laevis.L
ENSEMBL 10.0 ENSXETT00000106189 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029210 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066169 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084536 X. tropicalis
NCBI 10.0 mRNA065316 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093377 X. tropicalis
Xenbase 9.2 rna41300 X. laevis.S
Xenbase 9.2 rna83324 X. laevis.L
Xenbase 9.1 rna17045 X. tropicalis
JGI 9.1 Xelaev18009341m X. laevis.S
JGI 9.1 Xelaev18005645m X. laevis.L
ENSEMBL 9.1 ENSXETT00000093377 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084536 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066169 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029210 X. tropicalis
JGI 7.2 Xelaev16046655m X. laevis.S
JGI 7.2 Xelaev16077473m X. laevis.L
JGI 7.1 Xetro.A02661.3 X. tropicalis
JGI 7.1 Xetro.A02661.1 X. tropicalis
JGI 7.1 Xetro.A02661.2 X. tropicalis
JGI 6.0 XeXenL6RMv10006867m X. laevis.S
JGI 6.0 XeXenL6RMv10006867m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_890011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_890010 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_890002 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_890001 X. tropicalis
JGI 4.1 e_gw1.89.98.1 X. tropicalis
JGI 4.1 e_gw1.89.97.1 X. tropicalis
JGI 4.1 e_gw1.89.94.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029210 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000003 X. tropicalis
JGI 4.1 gw1.89.94.1 X. tropicalis
JGI 4.1 gw1.89.97.1 X. tropicalis
JGI 4.1 gw1.89.98.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_89000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_89000010 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_89000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_89000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890098 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_890094 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_890002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_890001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_890012 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7523076 BC159022 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu083k20 CR760278 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas113n21 CR942554 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001017227 X. tropicalis
AF077767 X. laevis.L
AJ005786 AJ005786 X. laevis.L
AJ243596 AJ243596 X. laevis.L
NM_001088287 X. laevis.L
AJ005787 AJ005787 X. laevis.S
AJ243595 AJ243595 X. laevis.S
IMAGE:5542798 BC073479 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001085586 X. laevis.S
XM_018232448 X. laevis.S
XM_018232456 X. laevis.S

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7574752 CX442192 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8958181 EL653544 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7523076 CX472518 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA017m15 CR568325 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA065d13 CR444921 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069h16 CR439808 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA017b07 CR420584 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr30I14 CN107537 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA031p19 CR571512 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA018b01 CR569694 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017d10 CR568515 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu029j23 AL646752 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074h24 AL776513 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070j07 AL778867 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089h08 AL778973 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074i24 AL781833 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083k20 AL785336 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu112p01 AL797639 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas113n21 AL959040 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7523076 CX472517 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas113n21 BX756528 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7574752 CX442191 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu074h24 BX688203 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074i24 BX688218 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083k20 BX692402 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089h08 BX693796 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA017b07 CR420585 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA065d13 CR444922 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr30I14 CN107536 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xl247b10 DC107890 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7980120 DR716947 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL085o07 BJ066356 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8317737 DY553399 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319404 DY575544 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8322272 DY562440 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319378 DY555478 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
17A1 AI031282 5' X. laevis.S Xenopus neurula plasmid library whole organism NF stage 13
xlk159c18ex DC063815 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5542798 BQ736591 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8532738 EB477444 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:8535754 EB478836 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
17A1 AI031283 3' X. laevis.S Xenopus neurula plasmid library whole organism NF stage 13
XL085o07 BJ083677 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8532738 EC277295 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61