Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (49) GO Terms (18) Nucleotides (484) Proteins (50) Interactants (1061) Wiki
XB-GENEPAGE-483417

All tropicalis laevis

Nucleotide sequences for sox11 - All

Models - Gene (31)
Models - mRNA (31)
Unigene Clusters (7)
Gurdon EST Clusters (2)
mRNAs (10)
ESTs (367)

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g018849 X. tropicalis
Xenbase 9.1 gene7652 X. tropicalis
JGI 9.1 Xelaev18030058m.g X. laevis.S
Xenbase 9.2 gene2977 X. laevis.S
JGI 9.1 Xelaev18028018m.g X. laevis.L
Xenbase 9.2 gene16503 X. laevis.L
JGI 7.1 Xetro.E00398 X. tropicalis
JGI 7.2 Xelaev16052832m.g X. laevis.S
JGI 7.2 Xelaev16012761m.g X. laevis.L
JGI 6.0 XeXenL6RMv10022992m.g X. laevis.L
JGI 6.0 XeXenL6RMv10055264m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_1250104 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023439 X. tropicalis
JGI 4.1 gw1.125.103.1 X. tropicalis
JGI 4.1 gw1.125.104.1 X. tropicalis
JGI 4.1 gw1.125.105.1 X. tropicalis
JGI 4.1 e_gw1.125.103.1 X. tropicalis
JGI 4.1 e_gw1.125.104.1 X. tropicalis
JGI 4.1 e_gw1.125.105.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250105 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1250007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_125000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000007 X. tropicalis

Models - mRNA (31)

Source Version Model Species
NCBI 10.0 mRNA093166 X. tropicalis
JGI 9.1 Xelaev18028018m X. laevis.L
JGI 9.1 Xelaev18030058m X. laevis.S
Xenbase 9.1 rna24637 X. tropicalis
Xenbase 9.2 rna48212 X. laevis.L
Xenbase 9.2 rna8620 X. laevis.S
JGI 7.1 Xetro.E00398.1 X. tropicalis
JGI 7.2 Xelaev16012761m X. laevis.L
JGI 7.2 Xelaev16052832m X. laevis.S
JGI 6.0 XeXenL6RMv10022992m X. laevis.L
JGI 6.0 XeXenL6RMv10055264m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1250104 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050621 X. tropicalis
JGI 4.1 e_gw1.125.103.1 X. tropicalis
JGI 4.1 e_gw1.125.104.1 X. tropicalis
JGI 4.1 e_gw1.125.105.1 X. tropicalis
JGI 4.1 gw1.125.103.1 X. tropicalis
JGI 4.1 gw1.125.104.1 X. tropicalis
JGI 4.1 gw1.125.105.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250105 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1250007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_125000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000007 X. tropicalis

Gurdon EST Clusters (2)

ID Species
1012070820 X. tropicalis
1012837303 X. laevis.S

mRNAs (10)

Clone Accession Species Library Anatomy Stage
IMAGE:6979794 BC080939 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_001008052 X. tropicalis
TEgg073l13 CT010559 X. tropicalis
IMAGE:6642770 BC070707 X. laevis.S
NM_001142362 X. laevis.L
xSOX-11-D D86075 X. laevis.L
D87209 X. laevis.S
D83650 X. laevis.L
xSox-11 and xSox-11-D D86076 X. laevis.L
NM_001090856 X. laevis.S

ESTs (367)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu067k02 BX683726 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9011488 EL856796 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8891336 EL852011 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8889939 EL849062 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8884378 EL840722 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st64j02 DC182573 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st49p17 DC179037 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st72a10 DC184451 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st77e06 DC185815 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st76e06 DC185553 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71a10 DC184181 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st67b03 DC183205 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st62f04 DC181985 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st56k06 DC180615 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st7b07 DC175029 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st5c18 DC174460 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st50j08 DC179174 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st24c03 DC170008 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st115n02 DC193420 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st114e19 DC193074 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st106a11 DC192725 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st89j14 DC188832 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st112m01 DC195339 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st104n13 DC191705 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st87j14 DC188341 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83g24 DC187329 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79l14 DC186433 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT13083 CX321212 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785840 CX317001 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627857 CX381380 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626617 CX380074 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616863 CX393248 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578298 CX416553 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7612054 CX404672 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7544565 CX486282 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542918 CX458424 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542634 CX450105 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540765 CX462053 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538956 CX451826 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534752 CX429675 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534346 CX428539 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534252 CX428229 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525864 CX443055 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574166 CX440820 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572403 CX435419 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570811 CX455127 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569241 CX457612 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560770 CX463604 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566662 CX507139 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556297 CX504044 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550669 CX509240 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7631406 DR901126 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597097 DR891567 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7517801 CX749046 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7515587 CX746263 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7515110 CX745299 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7514517 CX744561 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7550833 CX509387 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519874 CX480210 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562542 CX466904 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526305 CX443640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525933 CX443315 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525380 CX442674 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523924 CX438203 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529850 CX426966 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528965 CX425593 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527520 CX424488 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA045b07 CR585940 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA009j11 CR581423 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA005c23 CR576295 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA021c24 CR572658 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA018g22 CR569629 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017n10 CR568603 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA011e24 CR562128 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA023e18 CR441840 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA058l21 CR431348 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA009f04 CR417011 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047a03 CR415541 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA003e08 CR409686 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA007c19 CR409142 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004e11 CR408101 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144g06 AL968726 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas094a20 AL968299 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas091i24 AL966143 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103k09 AL964787 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas091i23 AL963201 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095o11 AL962437 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas122p14 AL957244 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas124k05 AL957134 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123n21 AL955746 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096j22 AL962104 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098d20 AL961250 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas099f07 AL958498 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas117m15 AL957508 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080j22 AL782737 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079o11 AL782587 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas075i24 AL778142 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas069h23 AL683580 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044d14 AL654571 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12