Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (25) Nucleotides (696) Proteins (41) Interactants (119) Wiki
XB-GENEPAGE-483860

Show:     All X. tropicalis X. laevis

Nucleotide sequences for lsm2 - All

RefSeq mRNAs(3)
Models - Gene (22)
Models - mRNA (34)
mRNAs (10)
ESTs (533)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016402 NM_001016402.3 U6 snRNA-associated Sm-like protein LSm2 774 bp NP_001016402 X. tropicalis
NM_001368157 NM_001368157.1 NP_001355086.1 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated S homeolog 704 bp NP_001355086 X. laevis.S
NM_001112740 NM_001112740.2 NP_001106211.1 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog 625 bp NP_001106211 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g38300 X. laevis.S
NCBI 10.1 XBXL10_1g35498 X. laevis.L
NCBI 10.0 XBXT10g019008 X. tropicalis
ENSEMBL 10.0 lsm2 X. tropicalis
Xenbase 9.2 gene47511 X. laevis.L
Xenbase 9.2 gene2617 X. laevis.S
JGI 9.1 Xelaev18042471m.g X. laevis.S
Xenbase 9.1 gene4277 X. tropicalis
ENSEMBL 9.1 vars1 X. tropicalis
JGI 7.2 Xelaev16071670m.g X. laevis.S
JGI 7.1 Xetro.H00818 X. tropicalis
JGI 6.0 XeXenL6RMv10051796m.g X. laevis.S
JGI 6.0 XeXenL6RMv10045274m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000024077 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_488000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_488000015 X. tropicalis
JGI 4.1 gw1.488.60.1 X. tropicalis
JGI 4.1 gw1.488.57.1 X. tropicalis
JGI 4.1 gw1.488.16.1 X. tropicalis
JGI 4.1 e_gw1.488.16.1 X. tropicalis
JGI 4.1 e_gw1.488.60.1 X. tropicalis
JGI 4.1 e_gw1.488.57.1 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA72368 X. laevis.S
NCBI 10.1 XBmRNA67041 X. laevis.L
ENSEMBL 10.0 ENSXETT00000111210 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070765 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074116 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108677 X. tropicalis
NCBI 10.0 mRNA093982 X. tropicalis
Xenbase 9.2 rna7607 X. laevis.S
Xenbase 9.2 rna92683 X. laevis.L
ENSEMBL 9.1 ENSXETT00000074116 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079171 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081114 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081556 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096847 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100456 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070765 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068325 X. tropicalis
ENSEMBL 9.1 ENSXETT00000051937 X. tropicalis
JGI 9.1 Xelaev18042471m X. laevis.S
ENSEMBL 9.1 ENSXETT00000104775 X. tropicalis
Xenbase 9.1 rna13951 X. tropicalis
JGI 7.2 Xelaev16071670m X. laevis.S
JGI 7.1 Xetro.H00818.1 X. tropicalis
JGI 6.0 XeXenL6RMv10045274m X. laevis.S
JGI 6.0 XeXenL6RMv10051796m X. laevis.S
JGI 4.1 e_gw1.488.57.1 X. tropicalis
JGI 4.1 gw1.488.60.1 X. tropicalis
JGI 4.1 e_gw1.488.60.1 X. tropicalis
JGI 4.1 gw1.488.57.1 X. tropicalis
JGI 4.1 gw1.488.16.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_488000007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051947 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_488000015 X. tropicalis
JGI 4.1 e_gw1.488.16.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
CN108372 X. tropicalis
TEgg127d09 CR761142 X. tropicalis
DN095519 X. tropicalis
DR900519 X. tropicalis
NM_001016402 X. tropicalis
BJ034029 X. laevis.S
BP698192 X. laevis.S
NM_001368157 X. laevis.S
BP709897 X. laevis.L
NM_001112740 X. laevis.L

ESTs (533)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069m06 BX683199 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8854055 EL815992 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7572031 CX513529 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572163 CX513772 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8925971 EL672118 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8955674 EL663784 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7713171 CX970889 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711665 CX968005 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711273 CX967605 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710279 CX965973 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7794962 CX964313 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703492 CX939985 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7691474 CX917240 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689368 CX913015 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7673111 CX882404 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672257 CX880788 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667881 CX854786 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7654673 CX824283 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs09O12 CN094255 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs30E11 CN088420 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22A02 CN083125 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:6982405 CF226335 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982405 CF150483 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5381490 BQ526979 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7628589 DR900519 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617540 DR897404 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608749 DR894680 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584860 CX415987 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584052 CX414902 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604457 CX411141 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625097 CX402800 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624781 CX401994 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3956 CX399656 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632221 CX397594 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616323 CX393001 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598583 CX388040 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597473 CX386259 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629144 CX383496 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628028 CX381852 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626577 CX380122 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu009d09 AL634884 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016a05 AL636103 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021g03 AL645414 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu033m17 AL656630 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043p07 AL660519 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu041d08 AL662660 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058e21 AL679616 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu092i01 AL779154 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069m06 AL779360 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082h11 AL780109 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093p05 AL780826 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072j04 AL781734 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064j07 AL783517 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096j01 AL787187 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099g06 AL791291 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117b21 AL792697 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115b08 AL794305 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120e12 AL796940 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124d03 AL797097 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu081d12 AL800609 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123h19 AL802119 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123a08 AL802165 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095f13 AL803421 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu100a19 AL805680 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8955207 EL659565 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8933899 EL634971 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8940943 EL631461 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8952633 EG654608 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8946305 EG654413 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8944757 EG652305 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7854251 DT396000 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7743682 DN036870 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7736644 DN023450 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7718268 CX980348 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716151 CX976501 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715316 CX975325 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas005l02 AL594432 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005g05 AL595306 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7517944 CX749814 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TGas009j12 AL628454 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7518927 CX750770 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TGas011a09 AL629122 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025k10 AL629779 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383431 BQ395367 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas008b17 AL630169 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383407 BQ395679 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas011d01 AL630665 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383793 BQ396373 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas015a15 AL631047 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383827 BQ396382 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas018c17 AL633716 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5384682 BQ397131 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas038a01 AL648001 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5384408 BQ397343 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas038j09 AL648232 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7607313 CX367865 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606245 CX366444 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601639 CX364988 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618410 CX363096 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41