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Summary Expression Phenotypes Gene Literature (11) GO Terms (36) Nucleotides (145) Proteins (48) Interactants (164) Wiki
XB-GENEPAGE-484040

Show:     All X. tropicalis X. laevis

Nucleotide sequences for casp7 - All

RefSeq mRNAs(6)
Models - Gene (26)
Models - mRNA (27)
mRNAs (12)
ESTs (48)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001016299 NM_001016299.2 caspase-7 1601 bp NP_001016299 X. tropicalis
XM_031905081 XM_031905081.1 XP_031760941.1 caspase-7 isoform X1 1633 bp XP_031760941 X. tropicalis
XM_031905082 XM_031905082.1 XP_031760942.1 caspase-7 isoform X2 1527 bp XP_031760942 X. tropicalis
NM_001097803 NM_001097803.1 caspase 7 S homeolog 1615 bp NP_001091272 X. laevis.S
NM_001087939 NM_001087939.1 caspase 7 L homeolog 1534 bp NP_001081408 X. laevis.L
XM_041568399 XM_041568399.1 XP_041424333.1 caspase 7 L homeolog isoform X1 1316 bp XP_041424333 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g32373 X. laevis.S
NCBI 10.1 XBXL10_1g30022 X. laevis.L
NCBI 10.0 XBXT10g017304 X. tropicalis
ENSEMBL 10.0 casp7 X. tropicalis
Xenbase 9.2 gene7273 X. laevis.L
Xenbase 9.2 gene35826 X. laevis.S
JGI 9.1 Xelaev18034239m.g X. laevis.L
JGI 9.1 Xelaev18036638m.g X. laevis.S
Xenbase 9.1 gene2562 X. tropicalis
ENSEMBL 9.1 lrrc38 X. tropicalis
ENSEMBL 9.1 casp7 X. tropicalis
JGI 8.0 Xetrov14050968m.g X. tropicalis
JGI 7.2 Xelaev16069416m.g X. laevis.S
JGI 7.1 Xetro.G00107 X. tropicalis
JGI 6.0 XeXenL6RMv10032290m.g X. laevis.S
JGI 6.0 XeXenL6RMv10008572m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016471 X. tropicalis
JGI 4.1 e_gw1.1474.9.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1474000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1474000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1474000001 X. tropicalis
JGI 4.1 e_gw1.1474.8.1 X. tropicalis
JGI 4.1 gw1.1474.1.1 X. tropicalis
JGI 4.1 e_gw1.1474.1.1 X. tropicalis
JGI 4.1 gw1.1474.9.1 X. tropicalis
JGI 4.1 gw1.1474.8.1 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA61066 X. laevis.S
NCBI 10.1 XBmRNA56518 X. laevis.L
ENSEMBL 10.0 ENSXETT00000111451 X. tropicalis
NCBI 10.0 mRNA085582 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035938 X. tropicalis
Xenbase 9.2 rna75930 X. laevis.S
Xenbase 9.2 rna21224 X. laevis.L
JGI 9.1 Xelaev18036638m X. laevis.S
ENSEMBL 9.1 ENSXETT00000035938 X. tropicalis
JGI 9.1 Xelaev18034239m X. laevis.L
Xenbase 9.1 rna8511 X. tropicalis
ENSEMBL 9.1 ENSXETT00000002923 X. tropicalis
JGI 8.0 Xetrov14050968m X. tropicalis
JGI 7.2 Xelaev16069416m X. laevis.S
JGI 7.1 Xetro.G00107.1 X. tropicalis
JGI 6.0 XeXenL6RMv10032290m X. laevis.S
JGI 6.0 XeXenL6RMv10008572m X. laevis.S
JGI 4.1 gw1.1474.9.1 X. tropicalis
JGI 4.1 e_gw1.1474.8.1 X. tropicalis
JGI 4.1 e_gw1.1474.9.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035938 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1474000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1474000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1474000001 X. tropicalis
JGI 4.1 gw1.1474.1.1 X. tropicalis
JGI 4.1 gw1.1474.8.1 X. tropicalis
JGI 4.1 e_gw1.1474.1.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:9040033 BC170775 X. tropicalis
IMAGE:9040059 BC170801 X. tropicalis
TGas098d19 CR761526 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016299 X. tropicalis
XM_031905081 X. tropicalis
XM_031905082 X. tropicalis
IMAGE:6318778 BC130126 X. laevis.S
NM_001097803 X. laevis.S
AB038170 X. laevis.L
IMAGE:5506240 BC078049 X. laevis.L
NM_001087939 X. laevis.L
XM_041568399 X. laevis.L

ESTs (48)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu144e12 AL796520 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA021k14 BX710650 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA010k01 CR448813 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA041c12 CR586233 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA003m20 BX707014 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8953053 EG654552 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:6982420 CF151113 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5381346 BQ526908 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7623603 CX372926 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598917 CX343227 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas030h08 AL649967 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098d19 AL958571 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas140l23 AL971810 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr05E11 CN120598 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr42J13 CN115341 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8931168 EL666275 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7534803 CX429370 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8955341 EL661164 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7576747 CX432269 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA074f10 BX729219 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA069e03 BX722334 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5381346 BQ526907 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TGas098d19 BX756157 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas140l23 BX764614 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7534803 CX429369 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576747 CX432268 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA021k14 BX710651 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA074f10 BX729220 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7623603 CX372925 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598917 DR892029 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6982420 CF242546 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8931168 EL666274 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xthr42J13 CN115340 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
PBX0085E03 AW639656 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0008D03 AW633487 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3472416 BI313219 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL203c19 BJ623034 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p11 BJ617936 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0008C03 AW633476 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3419936 BF047266 5' X. laevis.S Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:6867738 CA981313 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7981837 DR718147 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL062h05 BJ059388 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl251a02 DC109057 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl246m16 DC107795 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL062h05 BJ077895 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL203c19 BJ639713 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p11 BJ634470 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5