Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (70) GO Terms (22) Nucleotides (154) Proteins (51) Interactants (726) Wiki
XB-GENEPAGE-484864

All X.tropicalis X.laevis.L X.laevis.S

Nucleotide sequences for sox17b.1 - All

Models - Gene (29)
Models - mRNA (35)
Unigene Clusters (3)
Gurdon EST Clusters (3)
mRNAs (8)
ESTs (75)

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g019346 X.tropicalis
Xenbase 9.2 gene15871 X.laevis.S
Xenbase 9.2 gene2328 X.laevis.L
Xenbase 9.1 gene905 X.tropicalis
JGI 9.1 Xelaev18033725m.g X.laevis.S
JGI 9.1 Xelaev18032021m.g X.laevis.L
JGI 8.0 Xetrov14025787m.g X.tropicalis
JGI 7.2 Xelaev16029976m.g X.laevis.S
JGI 7.2 Xelaev16063627m.g X.laevis.L
JGI 7.1 Xetro.F00475 X.tropicalis
JGI 6.0 XeXenL6RMv10002783m.g X.laevis.S
JGI 6.0 XeXenL6RMv10048425m.g X.laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_830015 X.tropicalis
ENSEMBL 4.1 ENSXETG00000026438 X.tropicalis
JGI 4.1 e_gw1.83.163.1 X.tropicalis
JGI 4.1 e_gw1.83.164.1 X.tropicalis
JGI 4.1 e_gw1.83.166.1 X.tropicalis
JGI 4.1 gw1.83.163.1 X.tropicalis
JGI 4.1 gw1.83.164.1 X.tropicalis
JGI 4.1 gw1.83.166.1 X.tropicalis
JGI 4.1 AMZ_estExt_fgenesh1_pm.C_830015 X.tropicalis
JGI 4.1 TIM_estExt_fgenesh1_pm.C_830015 X.tropicalis
JGI 4.1 estExt_FilteredModels1.C_830030 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830163 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830164 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830166 X.tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_830052 X.tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_83000007 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000052 X.tropicalis

Models - mRNA (35)

Source Version Model Species
NCBI 10.0 mRNA095575 X.tropicalis
Xenbase 9.2 rna6779 X.laevis.L
Xenbase 9.2 rna46372 X.laevis.S
JGI 9.1 Xelaev18032021m X.laevis.L
JGI 9.1 Xelaev18033725m X.laevis.S
Xenbase 9.1 rna2897 X.tropicalis
JGI 8.0 Xetrov14025787m X.tropicalis
JGI 7.2 Xelaev16029976m X.laevis.S
JGI 7.2 Xelaev16063627m X.laevis.L
JGI 7.1 Xetro.F00475.7 X.tropicalis
JGI 7.1 Xetro.F00475.4 X.tropicalis
JGI 7.1 Xetro.F00475.5 X.tropicalis
JGI 7.1 Xetro.F00475.6 X.tropicalis
JGI 7.1 Xetro.F00475.2 X.tropicalis
JGI 7.1 Xetro.F00475.3 X.tropicalis
JGI 7.1 Xetro.F00475.1 X.tropicalis
JGI 6.0 XeXenL6RMv10002783m X.laevis.S
JGI 6.0 XeXenL6RMv10048425m X.laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_830015 X.tropicalis
ENSEMBL 4.1 ENSXETT00000001541 X.tropicalis
JGI 4.1 e_gw1.83.163.1 X.tropicalis
JGI 4.1 e_gw1.83.164.1 X.tropicalis
JGI 4.1 e_gw1.83.166.1 X.tropicalis
JGI 4.1 gw1.83.163.1 X.tropicalis
JGI 4.1 gw1.83.164.1 X.tropicalis
JGI 4.1 gw1.83.166.1 X.tropicalis
JGI 4.1 AMZ_estExt_fgenesh1_pm.C_830015 X.tropicalis
JGI 4.1 TIM_estExt_fgenesh1_pm.C_830015 X.tropicalis
JGI 4.1 estExt_FilteredModels1.C_830030 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830163 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830164 X.tropicalis
JGI 4.1 estExt_Genewise1.C_830166 X.tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_830052 X.tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_83000007 X.tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000052 X.tropicalis

Gurdon EST Clusters (3)

ID Species
1012076434 X.tropicalis
1012775126 X.laevis.S
1012790126 X.laevis.L

mRNAs (8)

Clone Accession Species Library Anatomy Stage
NM_203518 X.tropicalis
TNeu127g05 CR848411 X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
tGas004n06 AY157636 X.tropicalis
AJ001742 X.laevis.S
IMAGE:6633428 BC070615 X.laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001088164 X.laevis.S
IMAGE:8321455 BC141780 X.laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001098715 X.laevis.L

ESTs (75)

Clone Accession 5'/3' Species Library Anatomy Stage
st85o22 DC187944 5' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7577691 CX423144 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575439 CX430190 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554196 CX492956 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552737 CX494881 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541944 CX448661 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532143 CX432619 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564176 CX474551 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567189 CX507458 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7518782 CX750998 5' X.tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7518452 CX750511 5' X.tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7512690 CX741749 5' X.tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7557890 CX496998 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522769 CX471733 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525385 CX440017 5' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas121m01 AL970265 5' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029g13 AL652776 5' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047p19 AL651078 5' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021f04 AL633114 5' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas004n06 AL594183 5' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu090f17 AL804707 5' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121m10 AL794629 5' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu127g05 AL793062 5' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052j23 AL673251 5' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7026977 CF784946 5' X.tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7026327 CF783980 5' X.tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:5309151 BQ392386 5' X.tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
rst85o22 DC157807 3' X.tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7575439 CX430189 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552737 DR889222 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7518782 CX750997 3' X.tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7518452 CX750510 3' X.tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7567189 CX507457 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557890 CX496997 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554196 CX492955 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564176 CX474550 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522769 CX471732 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541944 CX448660 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532143 CX432618 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577691 CX423143 3' X.tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas143k12 BX760465 3' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas121m01 AL970264 3' X.tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu121m10 BX702240 3' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu127g05 BX697646 3' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu090f17 BX695269 3' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052j23 BX688445 3' X.tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7026977 CF784945 3' X.tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
sox17b.1-HAR58 BG886038 3' X.tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl278k15 DC117171 5' X.laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311d03 DC126386 5' X.laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk145m19ex DC050387 5' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk5o18ex DC054516 5' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk118k07ex DC041532 5' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk120j10ex DC042174 5' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7k08ex DC061163 5' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk78a08ex DC060325 5' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8321551 DY568086 5' X.laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321455 DY555730 5' X.laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7295756 CO390083 5' X.laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGp998P0614205 BX848940 5' X.laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634038 BU908553 5' X.laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633428 BU908090 5' X.laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3548671 BG021526 5' X.laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:4083626 BG019295 5' X.laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
rxl278k15 DC082497 3' X.laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl311d03 DC091341 3' X.laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk7k08ex DC027677 3' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk145m19ex DC017064 3' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk118k07ex DC008643 3' X.laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk120j10ex DC009162 3' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk5o18ex DC021136 3' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk78a08ex DC026856 3' X.laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7295756 CO389916 3' X.laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL150e14 BJ099337 3' X.laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3548671 BF615755 3' X.laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26